FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGA32.586206896551724No Hit
GCACAAGAGGCGGCTTCCGGAGTAGCCCTCGGTGAAGCCCCAGACCACAG21.7241379310344827No Hit
GCACTGACCACCATCGGCGCACCAGATTCTGGCGGAACGCCAGATGGAAT21.7241379310344827No Hit
GTAATATATTTTTAAAAGACTCAATAAAATGGCTTTAAAATGAGACCAAG21.7241379310344827No Hit
GCGCTTAGCTGTTCTCATCCGAGGATAACAAATGTTTTCAGAACCACCCA21.7241379310344827No Hit
GCCCAAGAGTAGTGATGCTTTCAATTTGGATATGCCAAAAAGGAGCCATA21.7241379310344827No Hit
GCTGAATGACAAAGAGCAAAGAAGAGTAAAAATGGCTTTGCTGGGGGCCA21.7241379310344827No Hit
GGCTCACAATGATCACGAGAAGGCGAGCCAACGTCCTCTTAATCGCAGAA21.7241379310344827No Hit
ATTTCATTGGATGATGACTCCATTCGAGTCCATTCGATGATTCCACTCGA21.7241379310344827No Hit
GGATCAGGAAAAGTCATCAAGGGCTGGGAGGATGGAATGCTGGGCATGAA21.7241379310344827No Hit
CACCTACATTTAATTGGCATACTTGAAAGTGTCAGGGAGAATGAAACCAA21.7241379310344827No Hit
CTGCACAACAGTCCTGAAATAGGTACTATTATGCCCATTTTGCAGTTGTG21.7241379310344827No Hit
GGATTCAACTCGATTGCAATGGAATGGAATAGAATGGAATGGAATGGAAT21.7241379310344827No Hit
AGAACGAGTTGGCCGTCATGCCCACGCGCCGCCCGTCCATCGCACGGGTG21.7241379310344827No Hit
CATTTTATGAGGCCAGCATCATTCTGATACCAAAGCTGGGCAGAGACACA21.7241379310344827No Hit
CTTCGGCTTCGGGACCTGGGTGATGGTGGTCCTGAACTGGCAGCATTGGC21.7241379310344827No Hit
ATGATTATTCCATTTGAGACGATTTGATGACTCCATTCGATTGTATTCGA21.7241379310344827No Hit
GAATGGAATTGTATGGAATGGAATGGAATGGTACGGAATAGAATGGAATG21.7241379310344827No Hit
GATTCCATCTGATTCCATTTGATAATTCCATTCGATTCCATTCGATGATG21.7241379310344827No Hit
GGGCCTGAAAGCGCTCCAAATGTCCACTTCCAGATAGTACAAAAGGAGTG21.7241379310344827No Hit
GTGTTCAAACAGTGTGTGTGTGTGTGTGTGCGTGTTACTTTTTATTACAA21.7241379310344827No Hit
ACTAGCATTTATGGAGGGCTTGCTTTGTGCTAGATCCTCATAGGGCCAAA21.7241379310344827No Hit
GCTCGCGTTACTGCCAAGCGAGCGTGGTGTGGTGCCCCCGACCTACAACT21.7241379310344827No Hit
GAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCA21.7241379310344827No Hit
GGGCAGGGTCCCTACACTGGATCTTGAAGGATGAGGAAAAAAATCAGACA10.8620689655172413No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA10.8620689655172413No Hit
GCCTTGTGCCTGGTCTTTCCATTTCTAGCAATGCTAATGATGTCTGCAGG10.8620689655172413No Hit
ATTCCGTTTTTTTCCGTTTGATGTTGATACCATTCGATTCCATTCGATGA10.8620689655172413No Hit
GGCATGCGCGCTATCACCAGGACCCGGCCAGCCGCTGGCTGCGCGCGTCT10.8620689655172413No Hit
AAGGGAAGGCAGTGGAAACTGTGTTTAAACTGCCACACAGCCTCTGGGGC10.8620689655172413No Hit
CTCCGCATCAAGCGCGAAATGCCAGGTGCCGGCGCCCACCGTCAGCATCA10.8620689655172413No Hit
CATAATAATTTTCTTTGGGTTTCATGACATGGAATAATTGGGAAGAAGTC10.8620689655172413No Hit
GAATCAAGCAGAAATGCTGTGGTTGAAAAATGCAATTGACATACTGAGAA10.8620689655172413No Hit
AGCATATTTTAGAGATAAGGTCCTATTAGCCTCACAAACAATTATCTAGA10.8620689655172413No Hit
AGATACTATTATCTGAGGTGAGAACTTTCCATTACTTGAAAGAACTAGCT10.8620689655172413No Hit
GTTTTGTTTTGTTTCTCTTTACTGTTATCCTCTCATCACACAAACATGGA10.8620689655172413No Hit
CTCCAGCACTGATGAAACTTAGAAACATTATACTGAGTGAAATAACCCAG10.8620689655172413No Hit
GAGCGAGGCATCGGCAAGCGCATCCGGCGAAGTGGTGGTCGAGGCGAAGA10.8620689655172413No Hit
CCTGGTAGATCGCCACGTCGTCGTTCTCGAAGGCATAGGCGCAGCCCGCG10.8620689655172413No Hit
GAAGTGAAGATGATGAAGATGAACAGAACATGACATTGAGAGGTAAAGCC10.8620689655172413No Hit
ATGTTGCCTAGGCTGATGTTGAACGCCTGAGCTCAAGCAGTTCTCCTGCC10.8620689655172413No Hit
GTACCAGCAACAGGCCGGCTATGGTGCACAGCAGCCGCAGGCTCCACCTC10.8620689655172413No Hit
GTCTAGCATTTGCATGATCAAAAACCAAGAAAAAGAGGAGAAAGAGTATG10.8620689655172413No Hit
ATACAGAGTAGCAGGCAGATATCTCTGCTTGAGGAATGAATATGTGTGTA10.8620689655172413No Hit
AAGTTCAACCCCGCACGAAGCGGGCGGGGGCCCGAACCGGCAGGGCGAAG10.8620689655172413No Hit
AATTAATTCAAGGTGGATTAAAGACTTAAACGTTAGACCTAAATCCTTAA10.8620689655172413No Hit
AGCAAATGCTGAGGGATTTTGTCATCACCAGGCCTGCCTTAAAGCTGTCT10.8620689655172413No Hit
CTCCCCTATTTAATCCCATATTTAAAAAGCAAATTTCCAAGGTAAACTCA10.8620689655172413No Hit
GGCATCTCCCCTTCCCTGTCCCACATCTCATGGCCAGATCACAGTCCCAG10.8620689655172413No Hit
GCACAACCCGTCTTCGGAGCCGACCGTGATGCCGCTCACGATGCTCGACC10.8620689655172413No Hit
ACTCTGTGAGTTGAATACACACAACACAAGGAAGTTACTGAGAATTATTC10.8620689655172413No Hit
CCTCAGAGCACTCCAAATATCCACTTTCAGATTCTAGAAAAAGAGTGATT10.8620689655172413No Hit
TCCTTATAACAACCCCATATGGAAATATTATCACCATTTCACAGAGTCCA10.8620689655172413No Hit
TTTATTGACATCATCATTGGGATGGATCAGGCGTTTTTCACCAACTGTGC10.8620689655172413No Hit
CAGCCACAGGTCCCCAAGGCTCCCCTCTCATTAGGGTCACAAGCCAGGCC10.8620689655172413No Hit
CATCAGTGCCTGGTCCAAGGGCGTGCGCCTGGCGTTGCAGTCATTGGTCC10.8620689655172413No Hit
CACCTACCTTTAATTGGCATACTTGAAAGAGTCAGGGAGAATGAAACCAA10.8620689655172413No Hit
GCACTTCAGTCTGGGCAATAGGTGAGACTCTGTCTCAAAAAAGAAAAAAA10.8620689655172413No Hit
CCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTCGATC10.8620689655172413No Hit
GCTGACAAGTGGATAAGTGCTAATCAATGAATGTACAGATTGTCTTTCCT10.8620689655172413No Hit
GTTAAGGAGTTGTCTGAGCCATATCGTGATGCGTTGAAAGTTCAGACTGC10.8620689655172413No Hit
GAATAGAATGGAATCACCGAATGGAATCAAATGGAATCATCATCATATGG10.8620689655172413No Hit
AGAGTATATCAACGACTTCGAACAATATGTTTGCGAAGCTTCAACATCAC10.8620689655172413No Hit
GTTCAGGATCATCACATTTTGCATTTGGCTTTCATGTCTTTTTACTCGCC10.8620689655172413No Hit
CAAGTTCGCAGTTGGCAAGCTGGAGACCCAGGAGAGCCAATGGGAGAGTT10.8620689655172413No Hit
GCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGT10.8620689655172413No Hit
TCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGT10.8620689655172413No Hit
GCGCCTAGCAGCCGACTTAGAACTGGTGCGGACCAGGGGAATCCGACTGT10.8620689655172413No Hit
GGTCCTGGGGAAAGTCCACCTTGGGGGTGCACTGAGAGATCAGGGGGATG10.8620689655172413No Hit
GCCAGGCGCCTCCTTCAGCGTCTACGGCCATACCACCCTGAACGCGCCCG10.8620689655172413No Hit
TTTTAAGAGAGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTAGCTCA10.8620689655172413No Hit
CACTAAACAGCTTATTGAAAAGGGCAAAATAAAATATGCTGATTAGACTT10.8620689655172413No Hit
GCACCCATCGGCCCAGCAGGTCGAAGAGCTGCGCGTCGTCGGGCTTGGCC10.8620689655172413No Hit
GAAGCACACCGTTTTTCTTTCTTCTTTCACGGTATCGGCTTCTATGGCGA10.8620689655172413No Hit
ACCTTGCGGCGCGCGGCCGAGTAATTTTTTTCTTTTCTTCGTGGCGATGC10.8620689655172413No Hit
CTTTCCAGATGACCAAAGGAATTTAAGACAGTTGTAAAAATCAAATTAAC10.8620689655172413No Hit
TCCTGGTCCTTAACACAATCTGTTACCAGCATGTTTGCATCCTTGTTTAC10.8620689655172413No Hit
CATCTCAAATAAGTTTCTGAGAATGCTTCTGCCTAGTTGTTACGGGAAGA10.8620689655172413No Hit
CCCCTAAACAGCGAAAAAGCCCAGCAGAAGTGCTGGGCTTTTTGCTGTCT10.8620689655172413No Hit
GATTGAGCCACTGCACTCCAGCCTGGGCGACAGAGGGAGACTCCGTCTCA10.8620689655172413No Hit
CAGCCGGACTGATTGAGGAAGTGGCAGCCAGCAAAATTAGCGGTGAAGAA10.8620689655172413No Hit
CCTCGCAGGTGCGCCAGAACTACCACCAGGACTCAGAGGCCGCCATCAAC10.8620689655172413No Hit
TTCTTATCTAAAATGACTGCAGAATATGTGAATCTTGTTTGGATTCTGAT10.8620689655172413No Hit
GACATGCACCATTCTTCGAACCTGCGGCCCTTGCCCGGGGACGGCCAAGG10.8620689655172413No Hit
CCTCCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCGAG10.8620689655172413No Hit
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT10.8620689655172413No Hit
TTCCATTCCATTAGATGATTCTATTCGGGTCCATTCGATGATTCTCTTCG10.8620689655172413No Hit
CCTTTGCCCGATCCCGGAAGATACGCTCTAAGCTCGGCAATCGCTCTTGC10.8620689655172413No Hit
GGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTT10.8620689655172413No Hit
AGGAATTTCAATACTAAATTTGGATAAAGGGAAGCCACCAGAAAACTAAA10.8620689655172413No Hit
GTGTACTTTTCCATAATCAATGATACCCAGTATTTATCTTCGTCATCTTT10.8620689655172413No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)