FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003674157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length146
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGAGAAGCGCTCGGTGCTGTCGGCGTGCAGCAGGAATTGCTGGTAGCG517.24137931034483No Hit
TGGCCGATCGTTTCAACGGTCAACTCAAGCCCCGCTTGGCGAGCGTTTTC310.344827586206897No Hit
TATTTCTTCTTAGCCTGACTTGACTCAAGCATAAGTATACACGTTTGTCC310.344827586206897No Hit
ACTACGAAGTGACGCCTCTCCTGGGCGGCCGTCCTGACATCGATCTGACC26.896551724137931No Hit
ATGCTATGGTGACTTGCTCGAGATCGTAACCGACAGCAGTCAAGCCAATC26.896551724137931No Hit
GGCCACAGCTGCGCATCGAGGCCCGAGGCCGTGCCGGAGACGCTCGCGCC13.4482758620689653No Hit
GCGAGGGATTTTGCTTGTATTGTGAATATAAACATCGCCGCTGGCGACAA13.4482758620689653No Hit
GGAGCAGTGGCAACAGCTGCGCCGCCGGCTGGCGCCCTGCGAGGCCTGGA13.4482758620689653No Hit
AACGAGGAGGTCGAGCTGGTGCCGAGGCGGGTGCGCGGCGCATGTCTTCT13.4482758620689653No Hit
GCCCGTGCGTGCACCAGGCCAGCAGCGGCGACAGAGCCATGGCGGTGGCC13.4482758620689653No Hit
GGCCTATATCTGCGGTTTTCCGCATATTTCTTTTGATCCCGATTTCACCG13.4482758620689653No Hit
GCGCGCCGCGGCGCGCATGCCGGTCGGACATGGCTTATCTCCCGGAATCG13.4482758620689653No Hit
GCCAGTGCGACCGCCTGAGAGGCGGCGTCGCCTGGGCGCCCAGGGTCATC13.4482758620689653No Hit
GCAGGTCACGCTTGAGCTTGAGCGTCAGGCCCAGGCTGTGGCAGCGCATC13.4482758620689653No Hit
ATGTTTCGCAACTGACTATCCACCCGCTAAGAGGCGGTTTGTTTGAGAAT13.4482758620689653No Hit
ACCCGCAGCTGCGCACGCACGACCGCTTCGGCAACCGGCTCGACTGGGTC13.4482758620689653No Hit
ATTCAGCGTCACGGATTCTGAGTTCCGGGCCGGAGAGACCATCACATACA13.4482758620689653No Hit
ATCCCGCTGAGGCCATCTCGTGGCTACCATGGGCACCTGTCTCTTATACA13.4482758620689653No Hit
CCGCTAATTAAGCGTCCGCTCATGCCGCCAATTGAGTTGCCGCTGATATA13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)