FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157
Sequences flagged as poor quality0
Sequence length146
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACATGGCCTACGCGTCGGAAAAGCTGCGCGAAGCGCGCTACGCGTTTT31.910828025477707No Hit
AAAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCGC31.910828025477707No Hit
GTCCAGTAATGTGATGCCTCCAGCTTTGTTCTTTTTGCTTAGGATTACCT31.910828025477707No Hit
GTAGATATAAGGTTATTTTGGGATTACCTCTTGCTTTATAAAAATTGGCA31.910828025477707No Hit
ATCCGAGCGCGCTTCCACCCGTTCTCGATATGGAGTGGAACCCGCAATCG21.2738853503184715No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG21.2738853503184715No Hit
ACTTAGAACTGGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAA21.2738853503184715No Hit
CCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCGAGC21.2738853503184715No Hit
GATCGCAGGTGTCACTGGCCTGACTGGTCCCTGGGTATTGGGGCGTATGC21.2738853503184715No Hit
TTTCTAAATATAATCTTTGTGTGAATGATAATTTAGAAATATACATTTTC21.2738853503184715No Hit
CCTTAGATTCCAGGTTAATTGGTTTCCTTGTGAATTTAGCTCTCCAGTGG21.2738853503184715No Hit
TCATGATGCCGACCATCAGGCCGCTCATGACATTGCCGACCACGCGGCCT21.2738853503184715No Hit
ATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGGGCA21.2738853503184715No Hit
GGCTGAAGCAGGAGAATCGCTTGAACCCAGGAGGCAAGTGCTGTGCAGTC21.2738853503184715No Hit
GGGAATTGAATGCAAACATCACCAGGAAGTTTCTGAGAATGCTTCCGTTT21.2738853503184715No Hit
CCTCCTACTAACTTGTCTCCAATAAGATCAGGCTGACTTTGAAAGGGTAA21.2738853503184715No Hit
TTTATATAGTGCATATCTGTAATTATATTACCAATTATTTAGTTGCACTT21.2738853503184715No Hit
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAG21.2738853503184715No Hit
AATACAGTAAATTGGAACCAAGGGTGGAGGGTGAAGGAATAGTAAAGGCA21.2738853503184715No Hit
GCTGGGGATAATGCGACCACGATCCGGTCTTGCCGATCAGGCGGTGCCAG21.2738853503184715No Hit
CGTAAGTATAACTATAATGCACAGGAACAAAAACAATTTTTACTGAGGCA21.2738853503184715No Hit
GGCTGGTGGCCTTCAATGCAATGACTCATAAGAACCTCTCCTTCAGTCAC21.2738853503184715No Hit
GTGTGTGAGTGAGTGTGGGGTCACACAGACACACCCACTGCTGCCACAGG21.2738853503184715No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC21.2738853503184715Clontech Universal Primer Mix Long (96% over 26bp)
CCATTCCTTTCCATTCCATTCGGGTTGAATCCATTCCATTCCATTCCATT21.2738853503184715No Hit
ATATTGAATTGAATGAAAATGAAAATACAACATATTAAATTTTGTGGGAC21.2738853503184715No Hit
GGCCTAAACACAGGCAACAACAAAAGCATTATTTGGCAGGCCTCAGGGAA21.2738853503184715No Hit
GTGTCCGTACAGGCCGTGGGAGCACTGGACAAGTCTGCAGTGTCCACAAC21.2738853503184715No Hit
GCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAA21.2738853503184715No Hit
GCTGTATTCATAAATGAATGGATGTGGCTGTGTTCCAATAAAACTTTACA10.6369426751592357No Hit
GTCTTGCGCATCGTCGTGGTGGTGATCGCCACATCCGACGTCTGCGCCGT10.6369426751592357No Hit
GTATAAAAATTTGGGTTGGTAGTTTGCCAACCCCTGGCCTAGAATATAAG10.6369426751592357No Hit
ACCTAGAGCTGCGCAACCGCGTGCCGGGCTACGCGGTGAGCATCGTGAAG10.6369426751592357No Hit
GCGCGTGACGGTGATCTCGACTTCCATGCGGCCCGCGCCGTTGATCACGC10.6369426751592357No Hit
CAGGGTGGCAGTCTGTAGTTTGGACTTTTGAGGCATATATGGGAATTCCC10.6369426751592357No Hit
GATCGACTGCAGCACGCGCAGCGTGACCAGGTTCTTCGACTTCATCAGCG10.6369426751592357No Hit
TTAGTAGAGATGGGATCTTGCTATCTTTCCCAGGCTGGTCTCACACTCCT10.6369426751592357No Hit
ACAGCAATTGGATGCCGTTAGCAGACCCATGACGTCTGCCCAAAAAGAAC10.6369426751592357No Hit
GGCTATATTCTATTTTGCTGATTTGGGAGACTAATGATGTAGGAAATAGA10.6369426751592357No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG10.6369426751592357Clontech SMARTer II A Oligonucleotide (100% over 25bp)
CACTGCTTCCCAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCT10.6369426751592357Clontech Universal Primer Mix Long (96% over 26bp)
GGAAGGTGCAGCTTTTCCATATCAGCTCAACCACGCCGCCAGTCCATTCT10.6369426751592357No Hit
GGGGGAAGCTGTAGCTACCACATCACTGTACTCCAAATGGGAACAGGTCA10.6369426751592357No Hit
ATGTCGGATGGGCGATGGAGACGTTGCCCGCACTGTGGACCCTCCTGGCC10.6369426751592357No Hit
ACCCTATGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCTG10.6369426751592357No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6369426751592357No Hit
GGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCATCCCCCCCGCG10.6369426751592357No Hit
GTGTTACAGCTCTTAAGGTGGCGCGTCTGGAGTTTGTTCCTTCTGATGTT10.6369426751592357No Hit
GATAGGTGTGTGGTAGATACACCAATTGGCCACCCTGAACCCCAGCATGG10.6369426751592357No Hit
GAGTAACTATGACTATCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAG10.6369426751592357No Hit
CTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTT10.6369426751592357No Hit
CATTTGAACTGGGAGGTGGAGGTTGCAGTGAGCCGAGATTGAGCCACTGC10.6369426751592357No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA10.6369426751592357No Hit
CTCATCCTCTTTGGGTATCATCAGGTCACATATAAAGACCTCTAGGGTCC10.6369426751592357No Hit
CCTCAACTACCTAACCAACAAACTTAAAATAAAATCCCCACTATGCACAT10.6369426751592357No Hit
CTTCCCAGAAAAGCTAAACAGAAGCATTCTCAGAAACTTCTTCGTGATGT10.6369426751592357No Hit
AATTATGGGAAAACAGCATGTTAGGAACATTGACAACTTGAAGGTAAATG10.6369426751592357No Hit
GGGAAATTACAAAACAGGGAAAGCTCTAAAAATAGACACCTGCAAAAAGC10.6369426751592357No Hit
GGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTATCG10.6369426751592357No Hit
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG10.6369426751592357No Hit
AATACAGTAAGTTGGAACCAAGGGTGGAGGGTGAAGGAATAGTAAAGGCA10.6369426751592357No Hit
AAGGAAAGCAATTTCGACAACCGAGCCGTGGGTGACCGCGGCCAGGCGTA10.6369426751592357No Hit
TTGTTTCCTGAGTAAGATGTCCTCTTGCAGAACCTGAAAACACAGGTACC10.6369426751592357No Hit
AGATAGATTGGAGACACTGAGTAAAGAAACAGAAAAGCCATACAGGAGGC10.6369426751592357No Hit
CCTTTTACCAAGAGCAAGCAGAGGCCACTGGAGGAGTTTAAGAACAATTT10.6369426751592357No Hit
GCAATTATCTGTTCCTCTTCCCTTCCTTTTTTCCTAGGAAACCCCAAATA10.6369426751592357No Hit
GGGCGGTGCAGAAGCACGTCGGCTTCCCGACCGTGATCCGCCCCAGCTTC10.6369426751592357No Hit
TACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACG10.6369426751592357No Hit
CCATTCCATTCCCCTGCACTCAGATTGATTCCATTCCATCCCATTCCATT10.6369426751592357No Hit
CTCATCCTCTTTGGGTATCATCAGGTCACATATTATGACCTCTAGGGTCC10.6369426751592357No Hit
TGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGCCTCGATGGTC10.6369426751592357No Hit
GTCTTCCATGTAGAGATGCGTGGGAAAAACCTGCAGATGCAGGCTGCAGC10.6369426751592357No Hit
GTGCAATCTCATAAACAAAAGGAACAACTTTTAGAAATGAAGATAACTTC10.6369426751592357No Hit
AGTACATTCGATGATTCCATTCGATTCTATATGATGATGATTGCATTCGA10.6369426751592357No Hit
GATTATAGGCGTGAGCCACCGCGCCCAGCCTGGTTTGATTTTAACCACTT10.6369426751592357No Hit
CACCAGGGACCACGCCGGCCGATATCGCAAATGGGATCGAAACAACCATC10.6369426751592357No Hit
GTGTGGCGATTCCTCAATCATCTAGAACCAGAAATACCATTTGACCTGGT10.6369426751592357No Hit
TGGGAAGAAGATGCCATCTAGGACTTCCATAGCTACAGAGGAGAAGTCAT10.6369426751592357No Hit
GGGCCACGGAGTTGTGGTGGCCAAACCACCCCAGCGACGCGGGGAGGGGG10.6369426751592357No Hit
GTATCAACGCAGAGTACATGGGGCTTTGGTGACTCTAGATAACCTCGGGC10.6369426751592357No Hit
GGGGCGCCGGGGGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACC10.6369426751592357No Hit
ACCGTACCCGGCCAAAGTTGAATTTTTTTTAAAAAAGAATGCGTTTGTCC10.6369426751592357No Hit
TGCGGGAGGAGCTTGAACACATTTTCTCGGTAGTCGTTCAGGTTGGTTAC10.6369426751592357No Hit
CTCCACAGGTAGCTCTAGGAGGGCTGGCAACTTAGAGGTGGGGAGCAGAG10.6369426751592357No Hit
CAGTCCAGCCCCTCGAAAGTCACGCGGACTTTGCCAGTAACCGGCTGCTT10.6369426751592357No Hit
GAGGTTGCAGTGAGCCGAGATCGCACCATTGCCCTCTAGCCTGGGCAACA10.6369426751592357No Hit
ATTCTAAACAATGGCAGTGACAAAAAACAGAATACACCTTTCTAAAGGGA10.6369426751592357No Hit
CTATAAAGATGCTTTTATAGCTATTACCTTACTGGACCCTCACAAACCCT10.6369426751592357No Hit
GACCCCTGGCCATGCCCTGCGCGGCAGCACACCGGGCGACGAACTCAGGA10.6369426751592357No Hit
TAAGACAAGGAGGGAAGAGTAAAATGAGGGAGACAGACAGGAAGTTAAAC10.6369426751592357No Hit
GTTTTTGTAGAGGCCTTAACTGTTTGAGGCTGTCTGTCTTCACAATAGCA10.6369426751592357No Hit
GTGTTACAGCTCTTAAGGTGGCGCGTCTGGAGTTTGTTCCTTCGGATGTT10.6369426751592357No Hit
GGCCTGCGCGAAGAGCGTGTCTTCATCGGCCTCGCGCGTGGCCCGCACCG10.6369426751592357No Hit
CCTCATGATCCTCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT10.6369426751592357No Hit
TAAGGGTGAAATTCGTGGAGCAAGTACACCTTTCCAGTTTCGAGCTTCTT10.6369426751592357No Hit
ACTAATTTGTGTTATCTTTAGCAGAGACACGGTTTCACCATGTTGGCCAG10.6369426751592357No Hit
GTACATGGGAAGCACTGCCTGTAAAGCCCTCGCATGAGAGGCCAGCCTGC10.6369426751592357No Hit
AGCCTGCCAGTGGATATTCGGACCTCTTTGAGGCCTTCGTTGGAAACGGG10.6369426751592357No Hit
CCGCAAGGTGGTGGTGCACAAGGGCGAGGAGATCCGGCTGAAGCCGCGCG10.6369426751592357No Hit
ACTTTAAATGTAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGC10.6369426751592357No Hit
GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTT10.6369426751592357No Hit
GCTTCCCAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.6369426751592357Clontech Universal Primer Mix Long (96% over 26bp)
GGCCATGTGCGTGCATGGCACGGGAAGCTTCGTCGATCTGGTGATTGGAA10.6369426751592357No Hit
AGACAGAACACAGATCTCTTTGTCATTCTCTCAATATCACTATCCTCTTT10.6369426751592357No Hit
GTCTTCCATGTAGAGATGCGTGGGAAAAACCTGCAGATTCAGGCTGCAGC10.6369426751592357No Hit
ACCTAAAACATTCCCTGAAAAAGAAATGTGTTCAACCGGGCACGGTGGCT10.6369426751592357No Hit
GAAGTACATAAATTCCACTCTGTTCAGAGAACGGGATAACATAGTTCAAC10.6369426751592357No Hit
GAATATGCCTCCCTCTTCTGAAAGAAGTATTACATATCCCATATACAGTA10.6369426751592357No Hit
TCCTTGGTTCATTCGCTGAAAAAGCCCCATAAGCGAGATCCTTTGCAGAA10.6369426751592357No Hit
ACCTAGTCGGCACCTTCCGCTGCGTCGCCAAATCGGCGGCGGGAATGCTG10.6369426751592357No Hit
GTCTATACTCCCCACTCAGCTTTTGTTGGCATGGATGGGGTGGGACACCA10.6369426751592357No Hit
GCGATATCCGATGCTCGGGACGACAGGAGGGAGGGGGCGGAACGAAAAAC10.6369426751592357No Hit
AGGTGTAACAGAAACATTGGAAATACAAGAAAGAGACTAAAATACAGAAG10.6369426751592357No Hit
CCATTCGATTCCATTCATTGAGGATTCCATTTGATTCCATTCAATGATGA10.6369426751592357No Hit
CCATACAACAGACTGCTTGGACTCTAGGAGGATTACTGCCATGGAAAGCA10.6369426751592357No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTCAAGACAGGGTCTTTCTCTGT10.6369426751592357No Hit
TTTCTGGGGCCTTTCAATTTTCAAAAGCACTCAGCATGCCCAAGCCCCAC10.6369426751592357No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC10.6369426751592357Clontech Universal Primer Mix Long (96% over 26bp)
TTCGAAGCGTGCATTGCAATTGACGTGGTAGCCGGCATTGACGAGCCAGT10.6369426751592357No Hit
GGTTTTCCCCATGCTGTTTTCATAATAGTGAGTTCTCACGAGATCTGATG10.6369426751592357No Hit
GCTTCGGCATTGCGCAGCGGCTCGTCGCCTCGGGCGGCAGCGTCACGCTG10.6369426751592357No Hit
GCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACAGGCAGATCAT10.6369426751592357No Hit
GGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGA10.6369426751592357No Hit
TCGTTCGCCTCTTCTCCGGGAGCCAGTCCGCGCCACCGCCGCCGCCCAGG10.6369426751592357No Hit

[WARN]Adapter Content

Adapter graph