FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATTTATTGATTTGGGCCCACTAAGTAGGGACACTGAAGTTAATGTTGC42.7586206896551726No Hit
TCGTCGAAAAGCCGGCGCTCGACGCGGTCGGCGACAAGCTGGTCGGGATG32.0689655172413794No Hit
AGTGCACCCCGGCGCCGAAGCCCAGGTGCGGGTTGCGGGTGCGTCCGACG32.0689655172413794No Hit
TTTTTAGACAGGGTCTCACCATGTTACCCAGGCTAGTCTCAAACTCCTGA32.0689655172413794No Hit
CTTCAATATCTCCGCGTCTTCGCGTTTCAAGATGCAGTTGGAATGCGAGC32.0689655172413794No Hit
GTAGCAATTCTGGGGTGGTCTGGCTCAGGCCCAAGCCATCTTGAGGTCCC32.0689655172413794No Hit
CTTCCGCTTTGACCTGTGAGGGGCTTTCACAGACGTCAACTCATCTGAGT21.3793103448275863No Hit
TAGGATGAATGGCAGACACAGTTGAGATTGTTTTTAGCTCCAGGCAGACT21.3793103448275863No Hit
AGATAGCATGATGCCTCCAGCTTTGTTCCTTTTGCTTAGGATTGTCTTGG21.3793103448275863No Hit
CAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCTAAAAT21.3793103448275863No Hit
CTATCACCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACAGCAACCT21.3793103448275863No Hit
CCAGGAATGCTGTGCAAGGGAAGACTTGGGACACATATCACAGAGGGGTA21.3793103448275863No Hit
GTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGT21.3793103448275863No Hit
CCTTCGCGGGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCA21.3793103448275863No Hit
CACAAAACTAAAAACAACTCATGCACACAGAACATGTGCATGCACGCACG21.3793103448275863No Hit
GAGCGAAACTCTGTCTCAAAAAAAAAGCTGGCCATGGTGGCTCACGCCTA21.3793103448275863No Hit
GCGCTGGTCGGTCTCGGGCGCCTGACGCTGGAGGAGCTGCTGCCGGCCTT21.3793103448275863No Hit
AACGAGAAGATGGCCGAGTTCATCAACCCGATCGCCGGCCTGGGCGACCA21.3793103448275863No Hit
AGCTGCTGCGTACCGAACGCATGGTGTTGGCGGCATCGCCGTGCTTTTGC21.3793103448275863No Hit
CTTTCAACTATAGCTACTGCACAGTCTCTGCTCTATTCTTGTTCTTTTGC21.3793103448275863No Hit
CAATGATTCCATTCCAGTCCATTCGTTGATTCCATCTGATTCCATTCAAT21.3793103448275863No Hit
CATTCCGGATGATTCCATTCCATTGCATTCCATTCCATTCCATTCCCCTG21.3793103448275863No Hit
AAGTCGTATTCCACGGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGA21.3793103448275863No Hit
GCCCTTGACAGCTTGGCAAGAGTTGTAGGTGTGTTTCCACCATAATTTAT21.3793103448275863No Hit
ATTCCATTCAATGAATCCATTCGATTCCATTCTATGACGATTCCATTCAT21.3793103448275863No Hit
GAAGTGCCATCCAAGTGCCAAGACCTGGAATAAGGGACCCCAAGAGCCCA21.3793103448275863No Hit
GCATAGTTTTTATCAGGTATGGCATTGTTGGTTGGCAACTTTTTTCTTTT21.3793103448275863No Hit
TTTCCGTTCAATGATTATTCCATTCGAGTCCATTCGATGATTCCATTCGA21.3793103448275863No Hit
GGGTGAAAGTAGCTCTGGTAAATAGTCCTTTAGTGATGTGGTGATAAGGT21.3793103448275863No Hit
CTATTACTGTTGCGGGAAACTGAGGAATGGTGAGACCGATATGGAGAACA10.6896551724137931No Hit
ACACGGAAGGGGTGGTCGCCATGTGGCGATGGATTCTTATCGGTCTCAAC10.6896551724137931No Hit
GTGGAGATTTCCTTTCTTTGGGTGTATGCCCAGAAGAAGGTTTGCTGGGT10.6896551724137931No Hit
TGTTAGGTGTATTCCTAGGTATTTTATTGTTTTTGTGGCTATATTGTGAA10.6896551724137931No Hit
CAACTAGCCATGCTTCCCCCAAAACCTAATGACATGAAGAACTCAAAATG10.6896551724137931No Hit
GGTTATTACTGTTCTTCAGAAATGCGAGTGAGTTTAAGGGAAATAGGGGA10.6896551724137931No Hit
CAGCTGTTCATCACGGCCAGCACGGCCGCCCAGCCGGTGAGGAGCCACCG10.6896551724137931No Hit
CCATAAACATCACTTCTATGGGACAATTGGGCCAGTTTCAATATTCATAA10.6896551724137931No Hit
GGGTCGGGTATAAGAGGCTGTATGCAGTGTGATGAAATGCAAAGTCCTGG10.6896551724137931No Hit
CGTCGAGGCGAAGGGTGATCCCAACGACCTCGTCACCGTCGCCGACGCTG10.6896551724137931No Hit
AGGTGTCGCAGGTTCGAATCCTGTCTTCCCGATATATGGCGGTGTAGCTC10.6896551724137931No Hit
GTTGCAGCTGGACGGCACGACCGCCCTGGACATCAACGGCTGGAAACAGC10.6896551724137931No Hit
CATATAAGTAGAATCACAGTGTTTGTCTTTTTTGTGTGTGTGACTGGCTT10.6896551724137931No Hit
ACTGTGCTCTGCTTTATCAACATGAATCACTTTGACCTGTAGCTGTCTCT10.6896551724137931No Hit
GAACGAAATGGAATGGAATGGAATGGAATGGAATGGAATCGTTCCGATTG10.6896551724137931No Hit
ATTTAGTAGTTAGTTCATATTCCATTGCATTAATGTTCCGACATTTATTT10.6896551724137931No Hit
GAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACT10.6896551724137931No Hit
GGTGTGTGCTAGGAGGGACCTCTGTGGACAATCCATGCCCCAATATCGTC10.6896551724137931No Hit
ATATAAACCAAAAAGCATCCAAGACAGGTTTCAATCAGTTTAGAAGTTTA10.6896551724137931No Hit
GGAATGGAATGGACGCGAAAGGAATGGACTGGAACAAAATGAAATCGAAC10.6896551724137931No Hit
TCTCAGCACTGCAGCTATCTTGGCAGGAAACCCCTGCCCCTAAGAAGAAA10.6896551724137931No Hit
GCGTAAGTCAATGCGAGAGGTCGCTCAAGGAGTTATCGATCACGCCGAGA10.6896551724137931No Hit
ATACTATACTATTCCACTTAGTTATTAAAAAATGGTAAGAGAAGTCTCAC10.6896551724137931No Hit
CCTCAAACAAGGACACTAGAGGGTCATCTCACTTCTTCTTTCTCTCTCAT10.6896551724137931No Hit
GAAGTGAGGTGGGGCAGGGTCTGGCGCTCAGGGGTCTGTGGCATTGATGA10.6896551724137931No Hit
GAGCTGCTCTGCTACGTACGAAACCCCGACCCAGAAGCAGGTCGTCTACG10.6896551724137931No Hit
ATATTGGTTGTAGTTGTTCACCTCATCATCTCTCCATTTGAGGCAAATGC10.6896551724137931No Hit
GGCTGGATTCAAGAGTGGAATTGCACAAGATAATATTCAACAAAATGTGC10.6896551724137931No Hit
CCGTCGAGCCAGACGTCGCCCTGGTAGAAGAGGCCGTCGAACGTCAGCCA10.6896551724137931No Hit
GCCCGCAATGTTGACGCCTTCGCAGCGATCGTGCGACACATGGCTGTCTC10.6896551724137931No Hit
CCGGATGATTCCATTCCATTGCATTCCATTCCTTTCCATTCCCCTGCACT10.6896551724137931No Hit
GGCTATGTATGGGTAAAAACTATCTGGGTTACAGCAGTCATAGTTGAATG10.6896551724137931No Hit
CNCGCCTTAATAATTAGCATAAGGAGAGTGCAAAGAAAAAGAAGGCACAT10.6896551724137931No Hit
ATACTAAAAATGTTGAAGTTGAAATTGGCTGGAAGAACAGGCTCCTTCTT10.6896551724137931No Hit
GGGTGATCATTGCAGGGATAAGTCACAAAACACCCTGTGGTCAGATCCTA10.6896551724137931No Hit
GTATTTAAAGTGTTAATCTGATCCTTTCACTTCGCTGTTTGATCCTTTTA10.6896551724137931No Hit
ATTGCATTCCATTCCATTCCATTCCCCTGTACTCGGGTTGATTCCATTCC10.6896551724137931No Hit
ATTAAAGCATGGGGCAGCATCGTAGAAGACCCTGAAAAGGCAAAATCATA10.6896551724137931No Hit
GGCCAAGCCGTGTGCCCTAGCGCCTTCTCGAGGTCGTCACCGCGGATGAC10.6896551724137931No Hit
GAATGGAATCAACCCGAGTGCAATGGAATGGAATGGAGTGGAATGGAATG10.6896551724137931No Hit
GGTATCAAACTAGGGGTTTGGTGTCCAGTTGAGACATCATGTGCACCTGG10.6896551724137931No Hit
GCCTGGGCAACATGGCAAAACCCCGTCTCTACAAAAAATACAAAAAAATT10.6896551724137931No Hit
GAATGGAATGGAATGGAATGGAATGCAAAGGAATGGAATCAACCCGAGTG10.6896551724137931No Hit
GGAGCGGAATGGAATGGAATGGAAAGGAATGAATGGAATGGAATGGTGTG10.6896551724137931No Hit
CTCAAGAAGTCTTTGCCCATTCCAATGTCCTGGAGAGTTTCTCCAATGTT10.6896551724137931No Hit
GGTGGTGGCAGGTTACTTTTACACTAATAGAATGAGTAGGACCTGGTGAT10.6896551724137931No Hit
GGCTTACATGTAAAAATTAGACAGCAGCATTCTCAGAAACTTCTTTGTGG10.6896551724137931No Hit
GAATCACCTAATAGTATCTAATGGAACAATCATCGAATGGACTCAAATGG10.6896551724137931No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGATGGACACATCTCGTA10.6896551724137931No Hit
AGAGAGTTTCCCTCACCTCAGATCTTTCTTATACTTGGATCTCTGACTTT10.6896551724137931No Hit
AATTCAGTAAGGTTTTATCCACCACGGAAGCTTTTAATAAGTCCAAGAGG10.6896551724137931No Hit
CGCGAGGACGCAGGTCAGGAAGCTGCCGTAGGGCGCGGGCACGAGGCCGG10.6896551724137931No Hit
GGCGAGATCCGCCCGCTCGCTCTCGGCTAGGAAACCGACGTGGCCAAGAT10.6896551724137931No Hit
GTACGGCGGCGGCCACGGTGGTTTCCTCGTCGGCGATGGCCTGCAATGCG10.6896551724137931No Hit
GTAATGGAATGGAATCAACCCGAGTGCAGGGGAATGGAATGGAATGGAAT10.6896551724137931No Hit
GCAGTGGCACCATCATTGAGCACTACAGCCTTGAACTCATGGGCTCAAGC10.6896551724137931No Hit
GAATCATCGAATAAAATTGATTGAAATCATCATCGAATGGAATCGAATGG10.6896551724137931No Hit
GTCTCTTTCTTTTCTCAGTCTCTCATCCCACCTGACGAGAAACACCCACA10.6896551724137931No Hit
GATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTAGCTACAACACT10.6896551724137931No Hit
GGTATCGACCATGCTGTCGCTCCGCTGCGTTATGCCCAGCATGGCGATGG10.6896551724137931No Hit
GGATGGTCTTGATCTCCTGACTTTGTGATCTGCCCACCTACTTGGGAGGC10.6896551724137931No Hit
CTTCTGGAGGTATATGTTGTCTCCCTGAATCTGTGAGGGACTAAATAGCT10.6896551724137931No Hit
GTCCGGTGACGCTAATATCCGACCCCTGGACGACGGCAATTACGAGGTTC10.6896551724137931No Hit
ATAATTTAAACTTACAATATTTTCTCTCATTGCTCCCCTGTGCTTACATG10.6896551724137931No Hit
GAGGGATAGTGTCTGAATTTTTTTCATAGGTTAATAGGCAATTAGACATG10.6896551724137931No Hit
TGTCTATATAACACCTTGATGGCCCCAATTCTGAGAAAAAGGAAGGTTAC10.6896551724137931No Hit
ATTCCATTCGATGCCATTCCATTTGATTCTATTCCATTAGTCTCCGTTCA10.6896551724137931No Hit
GCACATATTAGGACCAAAGATAGCATCAACTGTATTTGAAGGAACTGTAG10.6896551724137931No Hit
ACTCATTCCAGCATTAACTCAAAAGTCCAAGTCCAAAATGTCATCTGAGA10.6896551724137931No Hit
GTCTTGTTTGTACATGAAGACCTGACTTTTGACTGATTTCCCAGGTTAGA10.6896551724137931No Hit
GCCAATTAAGACTTCGATTGAGGGCTTGATTTGGAATCCTTGGGAAAAGC10.6896551724137931No Hit
ATTCGATGATGATCACACTGGATTTCATTCCATAATTCTATTCGATTCCA10.6896551724137931No Hit
GCCCATGAGTTCGAACCGGTACAGAAAAGGAACGTGGCATTTCTGGGAAA10.6896551724137931No Hit
TGCACGGGCAACAGCGGCAGCGCGGTCTCGGGCGTGACGACGAGCGAAGC10.6896551724137931No Hit
ACACCAAGGTCATCACCCAGGGTATCACGGGCAAGACTGGCCAGTTCCAC10.6896551724137931No Hit
GTATCCATACGCTATCTCAACTAGCCCTCACTATGTCCTATAAAGTAGGT10.6896551724137931No Hit
GAACATGAGAGCGCCTTGCACATTGTCGGCCATAAGTACCATGACAGCGG10.6896551724137931No Hit
GATCACAAGGTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGTGAAACCC10.6896551724137931No Hit
GAACGGAACGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAACG10.6896551724137931No Hit
CTTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGA10.6896551724137931No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)