FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTAGACGAAAAGAATATTAAGGATGGAATTCTTTCATTGGTTTGGGG42.7586206896551726No Hit
TGCCGTGCCGGTAGCGCCAAGGCCCAACAGGCCGGCCAGCGCGACGCGCG32.0689655172413794No Hit
AGTACACACTGTGACCTGAAGAGGGAGCTCAAAGCCCCCCTCCACTCCAG32.0689655172413794No Hit
GTTCTGGCCGGTGGCATCGAACTTCACGCGCGACCACGGCATGATGGTTT32.0689655172413794No Hit
GCAATAAACAGTGACTAAGGCAGGCTCAGCCCTTGGGCCCTTGGGCAGCC32.0689655172413794No Hit
CCCCGCTGCAGCTGTTCGAGCGCACCGCCCTGCGCGACACCGAGGTCGCG32.0689655172413794No Hit
GAGAAAGAAATAAAGCGTATTCAAATAGGAAGAGAGGAAGTCAAATTGTC21.3793103448275863No Hit
GAATGGAAAGGAATGGAATCAACCAGAGTGGAATGGAAGGGAATGGAATG21.3793103448275863No Hit
GCCTAGTATACTACATCGAGACTCAGTGTCTTCAGAAACATCTACTTGAG21.3793103448275863No Hit
GCTCAACAAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCT21.3793103448275863No Hit
GTCAAGGTGAGACACAACTGGGAAAAGCCAAAGCAGGGGAAGTAAGGCCC21.3793103448275863No Hit
TTTTTGTTTCCTAGCTTGTCTTTTTTCTTCTGCTTCCTACTTTTCAGGTT21.3793103448275863No Hit
AGAAATCTACACCAAGATACATTACAATAAAATTTTCCAAATCAAAGGCA21.3793103448275863No Hit
GCACCACCAATGTTGAGGCTTCTCTGAATAGTGGGAAGAGGAGTTGGATA21.3793103448275863No Hit
CAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC21.3793103448275863No Hit
CGGGCATCACGGTGAACAGGACGGCTGCAAGCATTGCTTTCATGAGCGGC21.3793103448275863No Hit
TTCACTACCGCCTGGATCGCCGCGACGTTGGAGCTGTGATACGCCAGGAG21.3793103448275863No Hit
GGACTCGAATGGAATAATCATTGAACGGAATCGAAGGGAATCATCATCGG21.3793103448275863No Hit
CTTATAGCCAGTCTAATAGGAGTATTTTTCTAGTTTTCAAAGCCATTCCT21.3793103448275863No Hit
GAATGGAATCGAATGGAATCATCGAATGGTCTCGAATGGAATAATCATTG21.3793103448275863No Hit
GGAGTGGCATTAGTGATTCAAGACTGTCTTTCCTACCCTGTTTTAGTGCC21.3793103448275863No Hit
GTTTGAGACCAGCCTGGTCAACATGGTGAAACCCCCGTCTCTACCAAAAA21.3793103448275863No Hit
GTGCAGGCTGTTCGGGGTGACGACGTAGACCGCGCGCACCTCCCCGTTCT21.3793103448275863No Hit
ATTTACAAGTTAAATTCTGTCTTCCAGGTCCCTTTATTCTTCTTAATAAC21.3793103448275863No Hit
ATTGAACGGAATCGAATGGAATCATCATCGGATGGAAATGAATGCAATCA21.3793103448275863No Hit
CTCATGATTTGGCTCTCTGTTTGTCTGTTGTTAGTGTATAAGAATGCTTG21.3793103448275863No Hit
CTAATTCATATTATGAAATAAACAAATCCACACATTTGATCCCTGTCATG21.3793103448275863No Hit
ATATAATCCCGTTTCCAACGAAATCCTCAAATCTATCCAAATATCCACTT10.6896551724137931No Hit
TCTTCATGAACCAGTGCCAAGGTAGGGAAACCTGAATTATAATTGAGGAA10.6896551724137931No Hit
GTCCGAGAGATCTCACCTCACCGCTGCGTCGTCACCGCGCCGCTCGACGG10.6896551724137931No Hit
GCCCAGTCTGGAGTGCAATGGCGTGATCTCAGCTCACCGCAACTTCTGCC10.6896551724137931No Hit
GTTCACGCCCGCGACAAAGCAATTCTTGCCGTTTGCGTATTCCTGGCACT10.6896551724137931No Hit
GTCAACAGTTATGCTATAGATTACGTGACCTGTCATTGTATGATTAACTG10.6896551724137931No Hit
GTGCTATTTTATCCAATTTTTGGCTTTATATTTTTCTATCTTCTATACTT10.6896551724137931No Hit
CCCCAGTAGCTATGACTACAGGTGCTTGCCACAATGCCCAGTTAGTTTGT10.6896551724137931No Hit
GATGTGGAATCAAAGAAGATTATTTTGGAACTTTAAGGTTTAATGACTGC10.6896551724137931No Hit
GTCTCACAACCCTTAGAGCGGCTGTTATGCTAACTGAAGAAGATTGAAAA10.6896551724137931No Hit
TTCCATTTGAGTCCATTCGATGATTGTTCCATTCGATTCTATTCGGTGAT10.6896551724137931No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6896551724137931No Hit
TCTCTGCACTGATCTCCCAGGGGCTGTAACTTTAGTCTAGGCTCTGGCTA10.6896551724137931No Hit
CCTCCATACTATTCAAATGGACCTTGTAGGACTTGAACCTACGACCACTC10.6896551724137931No Hit
AGTCACATGGTCACACCTCACTGGGAGAGAGGTGAGAAATGGCTGTCACG10.6896551724137931No Hit
CCTTTAGACTTATCTAACCAGTTTATCATACATCCCTGCTGCCTTCAGTT10.6896551724137931No Hit
CCATGGGGGCAGGAAGAGAAGTGTGGGCCACGGGCCTACAACCTTCCTTG10.6896551724137931No Hit
GAACGGAAAGGAATGGAATGGAATGGAATGGAATGGAATGGAATTGAATC10.6896551724137931No Hit
ATTCTATTCGGGTTAATTCCATTCCATTCCATTCATTCCATTTCAATCGA10.6896551724137931No Hit
GGATGGCGGGAGCCGGCTATTTTGTTTCGCGATGTAAAGCGGCCGAAGGA10.6896551724137931No Hit
TTCAATTCCATTCCTTTCGTTTCCATTCCATTTGATGCCATTCCATTCAA10.6896551724137931No Hit
GAGAAAGGACAATTGTTAGTGGCATATGAGGGACTGAACAAGGGCCTGAG10.6896551724137931No Hit
GGATTCCACGGATGGGCACTCGAGCGCACCCGGCCCGGCGAGGAGGCGGG10.6896551724137931No Hit
CTACAGGTCAAAGTGATTCATGTTGATAAAGCAGAGCACAGTCTGTCTCT10.6896551724137931No Hit
GGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCAAATTATGGTAATTC10.6896551724137931No Hit
GCCCTGAACGTGCCCCTCTTCTACGCCGGCCTCGTGCCCGCGCCCTACGG10.6896551724137931No Hit
GGGGCATCTTCCGAACTTTTGCATAATTGATAAATCCTCTGAGAAACAGG10.6896551724137931No Hit
GGATAATATCCTGCAGGGTGTTTTCCAACTTGGTTCCATTCTCCCCATCA10.6896551724137931No Hit
GGTTGTGGTGAGCTGAGACCGCGCTGTTGCACTCCAGCCTGGGCGACAAG10.6896551724137931No Hit
GTATCATACATGCTCCCCATGATTATAAATTCTTCCTCCTTCCACTAAAT10.6896551724137931No Hit
GAATACAGAACCCAGAAATACATCCATATATCTACAGTGAACTCATTTTC10.6896551724137931No Hit
CTGGCTTCAGTGCAATTACAAATGCTGTACTTCTAACAAGTGGAACTATT10.6896551724137931No Hit
TCTTCAGGAACCAGTGCCAAGGTAGGGAAACCTGAATTATAATTGAGGAA10.6896551724137931No Hit
GAATGCAAGGCAATGGAATGGAATGGAAAGGAATGGAATGTAATCAACTC10.6896551724137931No Hit
GTTTTGGAGGTAAAAATCTGATATTGGATTTTAGTTTGTCGTACCTTCTG10.6896551724137931No Hit
ATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCGTTCC10.6896551724137931No Hit
CCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCGATTCGACT10.6896551724137931No Hit
GATACAAGCAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAG10.6896551724137931No Hit
CAGTTATGTACCGAAGCCGGTCATTCGTTTTTTGAACAATCCACACAACA10.6896551724137931No Hit
GGAATGGACTGGAATGGAATGGACACGAATGGAATGGAGTGGAGTGGAAT10.6896551724137931No Hit
GCTGTGCAACTTCGTGGAGAGGTGGGACCAGCTCACCCTCTCCCAGCGCA10.6896551724137931No Hit
CTCCCACACCTCTGGCTGTGTCTACTCAGCCCCTTATGATAGCTTCAGTT10.6896551724137931No Hit
GCAGTCGGGTTGATTCCATTCCATTCCACTCCATTCCGTTCCATTCCATT10.6896551724137931No Hit
TCCTCGAGCCGCGCCACCCGCTCGCGGACGGCCGGAGCCGACATCCCGAC10.6896551724137931No Hit
GAGCCCGAGCGCACCCCAGAGGTGGTGGAACAGGTGCGTGCCGGTCATGA10.6896551724137931No Hit
GAACTCCAAGCCTGTTCATGAGGGGTGTCCACAAAAGCACGCAAACTATA10.6896551724137931No Hit
GGCCAGAGATGTACACCCAGGCCCCAGGAGAACCCCAGGCCCCAGGAGGA10.6896551724137931No Hit
GGCCCGCTCGCCGCGCTTGCGCCATGGGTGGGCGTGTACGGCATCGGCGC10.6896551724137931No Hit
CTTTACAGATGAGGAAATTGAAGCGCAGAGAAATTTAAGTATTCCAAGAT10.6896551724137931No Hit
ACCTGAATGAGGCACCCCCATCACTTACCAGGGTTCTACGTGACCCTGTC10.6896551724137931No Hit
ATTCCATTCCATTCCATTCCATTCCATTCCATTCCTTTCCATTCCATTCC10.6896551724137931No Hit
CCATTTTACAGGTGAGAAAACTGAGGCTTAATCAATTTTGTGGCTTGTGA10.6896551724137931No Hit
TACCTCTACAGGTAGCTACTGTAATGTTCACCTTCTATTATATAAAGGGC10.6896551724137931No Hit
GTTGTAACGATTTTTTCTACTTTCTGCACTATTTCTGTATTCTATGATTT10.6896551724137931No Hit
GTGTTCTTGTCAGTGGTACGTTTGAACCCCACATCATTAAGTAATTCGAG10.6896551724137931No Hit
CATTATCTGCAATAGCCAAAAGGTGAAAGCAAACCAAATATCCACCAGCA10.6896551724137931No Hit
ACTCCAGACTGGGCAACAGAGCGAGAGCCTGTCTCAAAAAAAAAAAAAAG10.6896551724137931No Hit
CCATGTGTCGCACGATCGCTGCGAAGGCGTCAACATTGCGGGCCTGTCTC10.6896551724137931No Hit
ACATATGTTATCATATTACTGGCCCTCGGGAAGTGGCACTGGAGATTGGC10.6896551724137931No Hit
TTGTCTGGTTTGACCATCGGGGACTCTCGTCTGGCCTAGAGCAGCAGCCT10.6896551724137931No Hit
GGCCGACAACTGCGCCGAACTGAAGGGCCACGTGCCGAACGGGCTCGACG10.6896551724137931No Hit
GTTTTCAACCTTGTAGTTAATGATTTCTATGTTAGTATTTGTAACAAGAA10.6896551724137931No Hit
GTGTTTGGAAATTGTGAATATGATGAAGTGTCACTCCTGTAATTATGTTA10.6896551724137931No Hit
GGCATGTGCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGG10.6896551724137931No Hit
ATCTTGGCCACGTCGGTTTCCTAGCCGAGAGCGAGCGGGCGGATCTCGCC10.6896551724137931No Hit
GGCTCATCCGGCCAACCTACCGCCGGGCCGTTCCACCCGTGCCAGGCGAT10.6896551724137931No Hit
ATCCTCCCACCTCAGCCTCCTGAGCTGGGACTACAGGCATGCACCACCAC10.6896551724137931No Hit
ATTGAACTCCCTTACTCTCCATTACATTCCATTCCATTCGGGTTTTTCCA10.6896551724137931No Hit
GTACTATAAGTCCTAGCCAGAGCAATCAGGCAAAGAAATGAAAGGCATCT10.6896551724137931No Hit
GCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACCGCAACTTCTGCC10.6896551724137931No Hit
GTCCTCGAGATGCTACAGGGTACAGTCCATTTGAATTTTTATATGGATGC10.6896551724137931No Hit
TTCCCATACCAATTAAAAAAAAAAAACCCAGAGGCCAAGAAGGAGAATCT10.6896551724137931No Hit
TCTCCGGACTGCGGTTACATCTACCAGCACCCAGGAAATTACACCGTGCG10.6896551724137931No Hit
GCGCAAGCTCGATCCTGCGCGTAGCCTGCCACACCGTCCCTACCACTCGC10.6896551724137931No Hit
GGAATAATCCATGGACTCGAATGCAATCATCATCGAATGGAATCGAGTGG10.6896551724137931No Hit
ATAGGGTGGAACACGGTGATACCGGCCGCCGACTCAGCCTTATTTCAGGG10.6896551724137931No Hit
ATGTTGATTCCATTCGAGTCCATTCCATGTTAATTCCATTCGATTCTATG10.6896551724137931No Hit
GGACAAAGAGAGCCCAAAGGGATAAAATATCCTTACTAAAGATCAGCTTA10.6896551724137931No Hit
AGATAGAGTCTTGCTCTTGTCGTCCAGGCTGGAGTGCAGTGGCATGATCT10.6896551724137931No Hit
TTCCGGGGTTGCCGTCTCAGCGCTGTGCGGCGCAGGGATCTCCGCTGTCA10.6896551724137931No Hit
AGTGGGTATTGACAACTTTTTTTTTCCATCAGCCTTTCCAAGTTTCCTTT10.6896551724137931No Hit
GAAGATGAGAAGGTTTGGTCTGGTGAAAATGGATGGTATCACAGGCTTTA10.6896551724137931No Hit
CAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTT10.6896551724137931No Hit
GTGTAGCAGCAAGACAGAGAGGGAGAGCAAGGGAAAGAGATGCCTTGCCT10.6896551724137931No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)