FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGACCACCGTGTCCAGCACCCACTGGGCCCAACGGGCGACGGTGGAGG53.5211267605633805No Hit
GATTTCGTTGGAAACGGGTTCATCTTCACAGAAAAACTAAACAGGAGCAT42.8169014084507045No Hit
ACCAACGCTCAGCCCGTCACTACTGCACCGCTGATCGAGATACACCCCGT42.8169014084507045No Hit
GAATACAGAACCCAGAAATACATCCATATATCTACAGTGAACTCATTTTC32.112676056338028No Hit
TTTCAGAAGGAATGGTACCAGCTCCTCCTTGTACCTCTGGTAGAATTCAG32.112676056338028No Hit
AGTGGGGAGAGGTCGGACCAGCATTCAACTCACAGGCTCTTCCCAGCTTC32.112676056338028No Hit
ATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAA32.112676056338028No Hit
GATTAAGCTCAGCGAGGAAGGCATGTTAAAAGCCAAGACAGGCCAGAAGC21.4084507042253522No Hit
GTGTAAGGAAAGGGTCCCGTTTCTGTTTTCTGCACGTGGCTAGCCAGTTT21.4084507042253522No Hit
GAGTAGCGGCAGCGGTCGATCGGTGGCTCGACCTGCTCGCCCGTGGTGAC21.4084507042253522No Hit
GGCATTCGCCGTTGCTGGTGGCGGCGGATTTGCAGCGGCCGAACGCGGTC21.4084507042253522No Hit
GAGCCAGGAAGCAGAAAGTATATGCATCAGGTATGAGGAAGAAAATAGAT21.4084507042253522No Hit
GTCCTAGCCTAACATTTTCAGCCTGAAATCATCATTTTATTCTTGACAAT21.4084507042253522No Hit
CTGCACTGTGGCTATTTTTAAAGCTTTATTAAGATGTATTTTACATACCA21.4084507042253522No Hit
AATAGAATCAATACGAATGTAATGGAATGGAATGGAACGGAATGGAATGC21.4084507042253522No Hit
AGACCATTTCTTTTGAGTCCATTCTATTTGAGTCCATTCCCTTTGATTCC21.4084507042253522No Hit
GTGTGGCCATTCCTCAAGATCCAGAACTAGAAATACCATTTGACCCAGTG21.4084507042253522No Hit
CCATTGGATTGCCAATGCTCAAAGCAAGTAAATCATTTAAACATCGCGAT21.4084507042253522No Hit
GAGCTGGCTCGATTCGAGCGCCGCCAGCGTCAGCTCGATGTCGTTCGGAT21.4084507042253522No Hit
ACTAAAGCCCAAAAACAATAAAACAAAAAACAATCCAAACAGCAAAACGC21.4084507042253522No Hit
TCGTGGAGCTGGTCGGGTCGGCGGACGTCGACGAGGAGGAGCTGTCGTGG21.4084507042253522No Hit
ATTCTTCTGTTTGCACTCAATTCCAATTCATTTTTCTTCTTCCCACCCCT21.4084507042253522No Hit
GACCACCGTCACCGCGTCCTGCATCTGCTGCATCAGCTGGTTCAGCAGCG21.4084507042253522No Hit
TTCGTTATTGTCTGTCTTTTGGACAAAAGTCATTTTAACTGAGGTGAGAT21.4084507042253522No Hit
CTGCGGATATGGGTACGGCCCGGCGCGAGATTTACACCCTCTCCCCCGGA21.4084507042253522No Hit
CTATTGTTTCTTGACTTTTTAATAATCACCATTCTGACTGGTGTGAGATG10.7042253521126761No Hit
CCACAAATACGTGATTTGGAGAGAGGTGTGGAAATCTGTATTGCAACACC10.7042253521126761No Hit
ATGATTCTATTCGATTGCATTCGATAATTCCATTCGATTGCATTCGATAA10.7042253521126761No Hit
ATTCCATTCCATTCCTTTCGGTGCCATTCCATTCCACTCTAATCCATTCA10.7042253521126761No Hit
AGTATTCTCTCATCTTCTCCAAGAGGGGTCTTGATTTAAACTATTTCTAA10.7042253521126761No Hit
GTATATAGGCTGAGCAAGAGGTGGTAAGGTTGATCGGGGTTTATCGATTA10.7042253521126761No Hit
ACGCAGAGTACATGGTAAGCAGTGGTATCAACGCAGAGTACATGGGTTCC10.7042253521126761Clontech Universal Primer Mix Long (96% over 26bp)
GTCTGTTTGTTGTCCACCAAAGGCCAGAAAGGAGAGCCAATGCTTTAGGG10.7042253521126761No Hit
ATGCCATTCCATTCAATTCTGTTCTACTCGACTCCAATACATTCAATTCC10.7042253521126761No Hit
GAGTTTGCATTCCAGTATCGTCTGTACTGGAGTGCGCAACCGCCTGTTCA10.7042253521126761No Hit
ATATAAATGGTTAAGAGCTTTACTTTCAAATTCTGTAAAGAGCTTTACAA10.7042253521126761No Hit
ATGGAATGGAATGGAATGGAATGGAATAAACCCGAGTGCAATGGAATGGA10.7042253521126761No Hit
GCCGATATCCCGCCGTTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCT10.7042253521126761No Hit
CAGCAAATCCCCTTCCCTTTGAAGGTCTTTAGCAGTAGGGGGAGTGGGGA10.7042253521126761No Hit
GGTCGACGAGGCCGCGCGCACCTGGGCCTGGGACGTCCCCCCGTCCGTCC10.7042253521126761No Hit
TTCCATTCCATTCCCCTGCACTCGTGTTGATTCCATTACCTTCCATTCCA10.7042253521126761No Hit
AGGCTGGAGTGCAGTGGCACGATTTCGGCTCACTGCAACCTGTCTCTTAT10.7042253521126761No Hit
GATATGGACAGGAGACAGGGAAATACTGGGTAAAGAAGGTAGTTCCCCAG10.7042253521126761No Hit
GCTATGACCTGGTCTAAACCCTTTTTTTCTTACAGATGGGGAAACCAGGG10.7042253521126761No Hit
GTTGGGGCTCGGGTGACCGGTCAACCGGGACCTGATCCGACAATCGACGT10.7042253521126761No Hit
ATTCCATTCCATTCCATTCCGTTCCATTCCAATCCATTCCAGTTGATTCC10.7042253521126761No Hit
TCTTAGTTCTCTCAGGCTTCAAGAAACCATATCTTTCTTTTTATAGCGCA10.7042253521126761No Hit
GCCAGAAGGTTGAACTCGACGTCGAGATCTGGCCCACGTCGATCGTCGTA10.7042253521126761No Hit
GGAACAGGGCGACTTGATCTATCGCTCCCGGGTGCTGCACCAGAGACCAG10.7042253521126761No Hit
TTCTATCTCTATCTCCTCATATCAAGGAGATTGTCATGCTGTGCTTTGGA10.7042253521126761No Hit
CAGTATTTAGAGCTACCTAAATACGTCAGCATTTACACTCTTCCTAGTAA10.7042253521126761No Hit
AGTAGGGTGAGAACAGTGTACTGTACTGGGGCATGAAAGGCACAGTTATT10.7042253521126761No Hit
CTTATTCATGTGGTGCGTGGCCACTACTTGGAGCAGATTCGATCTCATAT10.7042253521126761No Hit
GGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCCCCCGGCCGTC10.7042253521126761No Hit
ACTGGGGAAAAAGAAAGCAGGAAACTCACGTCTAATCTTGTTGCAAATAT10.7042253521126761No Hit
GGGCCGGACCGACCGCTGCGCGCCGTCTTCATCCGGGCCCCCTGGGTGGA10.7042253521126761No Hit
GAAATAAGATGCTTAGATTTTAGGTCAGGTGAGAGTTGAAGAGGTTTTAA10.7042253521126761No Hit
GGAATGGAATGGAATCAACTCGATTGGAATGGTATCTAATGGAATAGAAT10.7042253521126761No Hit
GAATATAAGAGTTTATTTGGGCCAAGCTTGAGAATAGTAACCTGGGAGCA10.7042253521126761No Hit
ATAGTAGCCAGCGCCACTGGAGTGACTACCTTTTAGTGTCACAGACCCTG10.7042253521126761No Hit
ATACCCAAAGGAAACAAAGAGGCCATATACCGAGGATCCTCTAAAAGGAA10.7042253521126761No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAACCAGAACTCCA10.7042253521126761No Hit
ATCATCAATTGGTATTGAATGGAATTGTCATCAAATGGAATTCAAAGGTA10.7042253521126761No Hit
AACTCCCCACCTGGCACTGTCCCCGGCTACGGTCCCGCGAATCCGGGCGG10.7042253521126761No Hit
GGCAATCTGGAGATGTCTCAAGTATCTTGAAATAGAACTACCACTTGCCC10.7042253521126761No Hit
CCTACGACCCGCGAGGCAACGTCCAAAAGTCCACGAACCCCCAGGGCCCC10.7042253521126761No Hit
GGTAGCAACCGTCTTCCACTGCGAACGACGGTGCCGGGTATTGCTGCGGG10.7042253521126761No Hit
GGACGTGCAGCCGCTGAGCGATGCCGCGCAGAACACCCTGCGCAGCTGGG10.7042253521126761No Hit
CCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCGATTCGACT10.7042253521126761No Hit
GGAAAATGGTTAAGAAAGGTAAAGCTCTTAGTGCCGGCATGTTAAAACGG10.7042253521126761No Hit
CGCATTCGCCGTTGCTGGTGGCGCCGGATTTGCAGCGGCCGAACGCGGTC10.7042253521126761No Hit
TAGAAACATGAACTTTGAAGGTGTTGCTGCTGAGAGCCCAGCAGGAAGGG10.7042253521126761No Hit
GCCACGAAGATCGCTACTGCGACCAGGGTGCTCAATTCCGTGGTATCCAC10.7042253521126761No Hit
GAAAGGTTCATCTCTGTTAGTTGAATACACACATCACAAACAAGTTTCTG10.7042253521126761No Hit
ACTTAGACTTCACGTCCAGTTTGGTTACAAAGTCCTGTCAGTTCTGCACA10.7042253521126761No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG10.7042253521126761No Hit
ATTCCATTCCATTTCATTCCATTCCATTCCATTCCATTCCATTGCACTAG10.7042253521126761No Hit
AACTATAACGTGTCCACATTTTCTCAAGTTGCTGCTTTCATCTGAGAGTT10.7042253521126761No Hit
CCATTAGATGATTCCATTCGAGTCCATTCGATAATTCTCTTCGATTCCAT10.7042253521126761No Hit
GTTACACTAGTCTTCACCTGAAATAGTAAATTAATTCAGCAGTTTCCAGA10.7042253521126761No Hit
GTACCTCCTGTTACATTCACCATTGTGCTGGTGCTAGGGGCAGGTAGCTC10.7042253521126761No Hit
CCTCTGAGCGAGTCGCTATTTATGATCTGCTGCTGAGTGAGGATAAGGAC10.7042253521126761No Hit
CTTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCGCCC10.7042253521126761No Hit
ATATTAAATTTTGTTGGGAGAGTTTTCATGAGAAAACATGGAATAAAAAT10.7042253521126761No Hit
CCATAACAGCGCCGCCGATGACTTGCCCAATAAAAAGGCCAATTATCGCC10.7042253521126761No Hit
GGTATCAACGCAGAGTCCATGGAGTGGAGTCAAGTCGAGTTGAGTGGAAT10.7042253521126761No Hit
GACTGGGTTTCACTGTGTTGGCCAGGCTGTTCTCGAACTCCTGACCTTGT10.7042253521126761No Hit
CCTACGACCCGCGAGGCCACCTCCCCACGTCCACGAACCCCCAGGGCCCC10.7042253521126761No Hit
GATTGAAATAGAGCGGAGCAGAGTGGAATGGAATTGAATCACATGGTATT10.7042253521126761No Hit
GAATGGAATCATCGCATAGAATCGAATGGAATTATCATCGAATGGAATCG10.7042253521126761No Hit
GGCCGACAACTGCGCCGAACTGAAGGGCCACGTGCCGAACGGGCTCGACG10.7042253521126761No Hit
CTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGG10.7042253521126761No Hit
ATCCTCCCACCTCAGCCTCCTGAGCTGGGACTACAGGCATGCACCACCAC10.7042253521126761No Hit
GCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACCGCAACTTCTGCC10.7042253521126761No Hit
AAAAATAACCATCATCAATTGGTATTGAATGGAATTGTCATCAAATGGAA10.7042253521126761No Hit
TTATATAGGAAGAAAAGGGGAATTACAAACCTCCAATAAAATAAAACTTT10.7042253521126761No Hit
ATGTTGATTCCATTCGAGTCCATTCCATGTTAATTCCATTCGATTCTATG10.7042253521126761No Hit
TTTGTGGATTCTGCAAATTGATATTTAGATTGCTTTAACGATATCGTTGG10.7042253521126761No Hit
ACCTGACCCAGGCCGCCCGGGAAGGCAAGCTCGACCCGGTCATCGGGCGG10.7042253521126761No Hit
CTGCACTGTGGCTATTTTTAAAGCTTTATTAAGATGTATTTTAAATACCA10.7042253521126761No Hit
GCATTACCTCATTTAATCCTTATAAAACTTCTGAGTGGTAGAATCCTTTT10.7042253521126761No Hit
TTTTATAGTTTTTATTATTGTTCAGTCCACATTTACTTTCTCCCCAGATG10.7042253521126761No Hit
GAATGGAATGGAATGGAATCAACTCGATTGCAATCGAATGGAATGGAATG10.7042253521126761No Hit
CTCTTCATTGAATGCACACATCATAAAGAAGTTCCTGAGAATGCTTCTGT10.7042253521126761No Hit
GTCTTTTGCTGCCATGTTCTATTACTCCGAATGGGGATCTGTTGAATTAC10.7042253521126761No Hit
CTGTTCCGTCTGTATATATCTCGGTTTTGGTCCCAGTACCATGATGTGTT10.7042253521126761No Hit

[WARN]Adapter Content

Adapter graph