FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTATCAAGGACGGCAAGCTGATCAAGAACAATGCCTCCACTGACTAT42.0No Hit
CTGTGGGGCAGGCACACACACCTCCCGCCAGCTCCAATTTTGCACTTTTT42.0No Hit
CTCTCAGGCTGCGTGCAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTCA31.5No Hit
ACGGTCAACTTGTCTTCCTCAGAAAGTTCATCCATACCCAGGATGGCAAT31.5No Hit
TAGCAACTCAGGGCCTGGGAATTGTGGGGCAATCCGTTCTTAGGGACTGG31.5No Hit
CACCACCACCACCACCACCACGTCCCGCACATGTCGCCCAACCCGGGTTC21.0No Hit
AACCAAGAGACACCAATGGAGATCTGCCTCAATGGAACCCCTGCTCTGGC21.0No Hit
GGTCCAACTCCTGGCCGACATGAGCATGGACAATGTGGCACAGTTGTGGC21.0No Hit
GCTCCCGGGTCCCCCGGCCGTGGCCACCGCACCACCCCCAAGGGAGCCGG21.0No Hit
CCTGGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCCCCAGGATGTGC21.0No Hit
GCATCACCGTGAAGCCCGAAGCCATGGAAGCCGCCACGCTGCGCGGCTAC21.0No Hit
GCGCGACCACAGCTCCGATGACCACAACTGCTAGGACAGCCAGGCCAGCA21.0No Hit
TCTCGATACAGTGGGTGGTGGTGCATGGCAGTTCTTAGTTGGTGGAGCGA21.0No Hit
ATTACATACTTTCTCCTTTTCTGTGTCAGTTTATTCATGCCAATGGTTCT21.0No Hit
GACCTGTGGTAATCACTTCGCTCTTGGGGAACCGTGGCCAAGGGCTGCCC21.0No Hit
TGTACCACTACCAGCACCAACGGCAACAGATGCTGTGCCTGGAGCGGCAT21.0No Hit
GGGCGGAGCCAGTGTCCACTTTCGGGTGGGGGCTGGAGCCAAGAGGCTGT21.0No Hit
TTCCAGCTCCTCCCTGGAGAAGAGCTACGAGCTGCCTGACGGCCAGGTCA21.0No Hit
CCACTGCACTCTAGCCTGAGTGACAGAGCAGACTCCTGTCTCAAAAAACA21.0No Hit
CCATGAGGTCGAGGGGTCCACCCGAAGTGTCTATCACGATGCCGCCTGCT21.0No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT21.0No Hit
CCCCACCACAGCCAGCTGACTTTTTAACTTTTCTGTAGAGGTGGAGTCTT21.0No Hit
GACACCGTCAGCTTCCTAGTAATAAACACCGACTTCCTGGTCTTGGATAA21.0No Hit
CGTCAAAGTCATTCTCCGTCCAGCTTTGTTCTGTTGCTGGTGAGGAGCTG21.0No Hit
TCCGGGGCCCGAACGCCGGGCTCTGGCTCATGGCGGGAACGCCCGACTGG21.0No Hit
ACCGTGAACAGCTCACCCAGTGGCTGTTGCCCTCCTCCAGCCCTCAGCTC21.0No Hit
AGCTGCTGCTGACAGCTGACGACCGCGTGAACCCCTGCATTGGGGGTGTC21.0No Hit
GCCCCAGCACAGGACAACATCTTGTTGATGCGGATGACGTGGAAGGGGTG21.0No Hit
GGTCAGCTGGGTCCAGCTTCCCTTCTCCTTCTCCTTCAGGGCCTGCTCCT21.0No Hit
GTCCAGGAGCTGCAGGCCCGGCAGGCCGGCAAAGCTGCCTGCGTCGAGCA21.0No Hit
GGACAGAGACCCAGAGAGATGGGGACAGAGACCCAGAGAGAGAGGGACAG21.0No Hit
CCCACATGCACCCACACCCACATGCCTGGCAGTACACAGAACTGTATGCA21.0No Hit
TAATAGGACCTTCCTGCTAGGGTTATGAGGATTAAATGAGTTCATATGTG21.0No Hit
ACCATACTCCCCTCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG21.0No Hit
GTACAGCGCCATGCGGGACCAGTACATGCGCACCGGGGAGGGCTTCCTGT21.0No Hit
CCGCAGCTCCCTCCTTTGCCTGGCAGAGAGGCCTTTGGCTTTCTTCTTCT21.0No Hit
AGTTACCCACCCCAAACTGGATCCTACAGCCAAGCTCCAAGTCAATATAG21.0No Hit
GTCCAGCACTACACAGCTGCAGGCACACAGATGGTACACATTCCCAGAAA21.0No Hit
GATTACAGGCATGAGCTACCATGCCAGGCCTCCTTGCAGGGTTTTCTATG21.0No Hit
AGGAAAAGGAGTTCACCTTCACCTGGCTCCCAGACCCTGCCTCAGATTTT21.0No Hit
CAATTCAGAAGAATCTTGCCAGGGAAGACTGGTAAATGGACGTCAACGTG21.0No Hit
CAAGGCGTGGTGGTGCATGCCTATAATCCCAGCTACTCGGGAAGGCTGAG21.0No Hit
GGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACC21.0No Hit
CGTTGGCGCCCGGGCCTTAGGCAGCCTTGGTGCTGACGGGGAAATTAACC10.5No Hit
CCCGAGTCTTCCTCAGGAGCTTCTCAGACACACAGTCTTCGTCGTCAGGT10.5No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC10.5No Hit
TGGCCAAACTTGGAGGTGGTGTCAATGAACTTAAGGTCAATCTTCTCCAG10.5No Hit
GGGGATCTCAGTCACCAAAGCTTTTCAGTGACTCTGATGGAGAATCAACT10.5No Hit
GCTGGGGGCTGCCCGGATGTCCCAGATGCGGATGGAGGCGTCAGCTGAGC10.5No Hit
GTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAAT10.5No Hit
GCCGAAGAGCAGCCCTGCAGCCAGGGACGGCACGCTGCCTGTTTTTACAT10.5No Hit
TCTCAGTCCCACACAGGCAGCTGTCTCAGGCTTTACAAGCGATGAGAGAC10.5No Hit
ATGAAACCCTGCTCGAAGGCTACTATGCCTACTACTTCTCAGCCTTCTCT10.5No Hit
CCAGTGAGCTGGCATCAAGGAGAGGGGTTGCATCTGGAATCTTTTTTTTC10.5No Hit
CGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAGGTAGCTGG10.5No Hit
GAAGAGCAGGGACTTCAATGAAGAGTGTCCCCGGCTCAGGATTTTCTCGC10.5No Hit
TCGTTGACCTCGTCTGTTATGTAAAGGATGCGTAGGGATGGGAGGGCGAT10.5No Hit
ACTTTGAGCGATCTCTCACATGATGGGGTTCTTTAGTACATGGTAACAGC10.5No Hit
GGCCAAGAAGCCTGCACTGGTGGCCAAGTCCTCCATCCTGCTGGATGTCA10.5No Hit
GGAGAGGACGGGACGCACTGCACCCACTGTCATCACCTAAGAAGACAGGC10.5No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC10.5No Hit
GTCTATAGCGGATCCCACTCCCATGGAGCCCAGCAAGCTAAGATCTACTG10.5No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.5Clontech Universal Primer Mix Long (96% over 26bp)
GAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAACTCTTTCCA10.5No Hit
GATCCCAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG10.5Clontech Universal Primer Mix Long (96% over 26bp)
TCCCAGGCCTGGTGCATTGACCCCCACGCCCAGTCTCTCCAGCCAGGCCC10.5No Hit
CCGCATGCTGCAGCACATGGTTCAGGATGCGCTGCTCCTTGGTGTCACCC10.5No Hit
GGCAAGAACAGAGCCCTGGCCTGGGCTCTGCTGGCCGCAGCCTCAGGAGC10.5No Hit
GGATGGAAAGTCCAAGATCAAGGTAGTCTGCAGATTTGGGGTCTGGCAAA10.5No Hit
ACCATAGACTGGGTGGCTTATAACAACAGAAATTTAATACTCACAGTTCT10.5No Hit
ATCTTGATCTTCATTGTGCTGGGTGCCAGGGCAGTGATCTCCTTCTGCAT10.5No Hit
GTAAAGGGGAACATAGAACTGAAGAGACCTCTGATTAAGGCCCCTTCCCA10.5No Hit
GTCCACTCTGATTCGACTGGCTTACATTACAGGCCTGCCACCCTTATCCA10.5No Hit
GCATAGCCCTCATAGATGGGGACATTGTGGGTGACACCATCTCCAGAGTC10.5No Hit
GATTGCTGAGTGTCATCTCAACCCCATCATCCTGCCCCTGTGGCATGTCG10.5No Hit
GAGTCTCCTCCTTGCGCAGAGGGCACGGCAGAGACTAACGTGTCGTGCCC10.5No Hit
CCGGGGAACAGTCGCATGACGAGGCAGTTTCCAGAAACGTGTATCACATC10.5No Hit
AGGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCACATCAAGTGCTTC10.5No Hit
GGCATGGAGTGCGTGAAGAGCCGCAAGAGGCGGAAGGGTAAAGCCGGGGC10.5No Hit
GGCCCAGGAACCTGCAGCGGCTGTCTGAGGACCACAGGCAGCCAGCCACA10.5No Hit
AGACACACCAGGATGGGGGCTGCCCGTGCTCCCAACATGGCCACAGGGAG10.5No Hit
TTAGTCAACAGTGGAAAATCTGAAGAGATGCAAGCAGGAAAAAGAAATTA10.5No Hit
GTCACTGAGCAGCACCGGCAGATGGGCAAGGGTGGCAAGCATCACCTTGG10.5No Hit
GCCTGAGTGCCCTGTGAACCTGGTCTGAGTTCCAACATGTCTCCTCATCC10.5No Hit
GGGTGGCCCGACGCTCCCAGCGGCCCTCATCCATCAGGAAGGCCTCTACA10.5No Hit
GGGCAGCACATTGGAAGCCCTCATGAGTGCAGGGCCCGCCACTTGTCCAG10.5No Hit
GGCCTGGGCTGTTCCGCCCCGTGGCTCCCCAGGGGCAAAGCCATGAGGAT10.5No Hit
ACCTAGACCACAACAAAATCCAGGCCATCGAACTGGAGGACCTGCTTCGC10.5No Hit
GGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAACGGCCTGGCCGG10.5No Hit
AGTGACATCCTCACGACCTCACAGACTCTGGAAACAGTGCCCCTAATCCC10.5No Hit
GTGGTGGGAAGGTGCTGATACCTGTGTTCGCGCTGGGCCGCGCCCAGGAG10.5No Hit
GCCATAGGCTGGAGATCATCGGTCCCTTGGCCCTGCTAATGTAATGTATT10.5No Hit
GCTCCTTGTTTCTTGGCACAGATATTTCCACCAGAGGTAGGGCCTCCTTT10.5No Hit
GTCTTTTCCTGTCCCTCTTGCTGGTGCTCCTTGCACCTTAGTCCCAGCTC10.5No Hit
CAGTAAGGGTCATAGAAGAGCCCGTTCTGCTCTGAGTAGAAGATCTGCAG10.5No Hit
CATCCAAACTCCCTGAAGCTTCACCGGCGCAGTCATTCTCATAATCGCCC10.5No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGTGCTTCCTCAGACCTTTC10.5No Hit
CAGTAGCTCCCAAGAGTGAGTTGTGGCCGGGCATGGAAGCTCATGCCTGT10.5No Hit
AGGTCGATCATTGGATAACCAACCAGTCTGTCAGCACACTATAAGCGCTG10.5No Hit
GCCTTGGACACTTGGGTTTGGGAGTGAACGAGAAAAAAGCTTCATGGGGT10.5No Hit
CGCTCAAAAAGGGGGTCCAGCTGGGCCATCAGGTTGTTCAGGTGCTGCTC10.5No Hit
GGATTCTTGAGGGCAAAGTCTGAGTAAATCTCATAAATCTTTCGGAGAAG10.5No Hit
GTCCTAGGACACAGAAACACGCTACTACTAAAGACCAGAGGAGAGGCATT10.5No Hit
GGGCTGTCCACGGAAATGCCACGGCCAAGAGCCCAGGTCCTTCACGCTGG10.5No Hit
CCCCAGCTCTTGTCCAGTGAAAGTGTGAACCTGCGGATCGCTGCCGGTGA10.5No Hit
ATTCTGAAGGGAGCCTTTGATGAGGGTGAAGATGGGGAACTGGAGCAGAG10.5No Hit
CGGTGGAGGCGTGCGTGAACATCGCCCAGCTTCTGCCCCAGGAGGATCTG10.5No Hit
GTGATGCCAATGCGGGCACAGATGGTCATGAGCATGTCAGTGACAGTCTT10.5No Hit
CTGGAGAGCTGGAGTCAATTCCGGCGAATCCGGTCCCGCCGTGCATCATG10.5No Hit
CCCCTACATGGTGGACATGGGATGAGACGGCCTTCAGTTACTTCCTCTTG10.5No Hit
CTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA10.5No Hit
GGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTC10.5No Hit
CGCCAGGGCTGTCATCAACATGGATATGACATTTCACAACAGTGACTAGT10.5No Hit
CTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAG10.5No Hit
ACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTA10.5No Hit
ACTCTCTGGAGCGGCGTCTGGAAGCTCTTGCTGCTGAATTTTCCTCCAAC10.5No Hit
GGATATTGCTGTCCCTTGTTACAGAGCATGAGCCCTGCCCAAAGACTGGA10.5No Hit
CTGAAGTACCCCTCACTGGCCTGGGTCCCCTCCTTCTGGGTGGTCTCGCC10.5No Hit
GATGTGTCCTGGTTTCGGCAGCGTAGCCAGCTGCTGCTTGAGGCCATGGC10.5No Hit
GGGCAAGAGCTCGGGCCCCAGTGCCAGGAAAGGCAAGGGGCAGATCGAGA10.5No Hit
AGGAAACACAGCTTGTCAATTTGGTCTTAAAGTGTACAGTGGAGTGACAT10.5No Hit
GCTTGTAGGTGCCCAGGAGAGCTCTGCAGTTGGGACAGTAATGGTCCACG10.5No Hit
GAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTT10.5No Hit
TGCCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG10.5No Hit
CTTCCCCTCCATCGTGGGGCGCCCCAGGCACCAGGGCGTGATGGTGGGCA10.5No Hit
GCTTCGTGTTGCCCCTGAAGAGCATCCCACCCTGCTCACGGAGGCACCCC10.5No Hit
AGGCTACTACGTGCGCGATATGACAAGTTAACAAGACGGCGCAGGTTGAT10.5No Hit
AGGCTATCCAGCGTACTCCAAAGATTCAGGTTTACTCACGTCATCCAGCA10.5No Hit
CTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGG10.5No Hit
GAGTACATGGGGCTCTGTCAGTCGCGAGCGAACGACCAAGAGGGTGTTCG10.5No Hit
GGACAAGAGGGAGGACTGCATGGCCCCCCGGGTGATTGTCATCAGCCGCT10.5No Hit
CTGTGAATCTGAGCAACCTGGCATTCTGCTTACTGGCCAGAAAGCTGGCG10.5No Hit
ACTCTGTTGCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGTAAC10.5No Hit
GATCTGTACCGGGACCGGAAACTTCTTGGTGCTGAAGAGAGGATCATGCA10.5No Hit
TTCTTTCTCCTCCCTCTTTTCTTCTTCCTTTCTTTTCTCCTTTCTCCTTC10.5No Hit
AGTTAGGTTTTGTCAAGAAAGGGTGTAACGCAACTAAGTCATAGTCCGCC10.5No Hit
CACCCAGGGTATTCCATAGCTTGATGGTTTTATCTCGAGATCCAGAGACA10.5No Hit
TGTGAGGGGTGAACCTTGGCCTCCAGGACATCTGCACCCCCTCCCCACCT10.5No Hit
GGGTATGCCCTCCCCCATGCCATCCTACGTCTGGACCTGGCTGGCCGGGA10.5No Hit
CTCGGGGCCTGGTGGGCGCGGCCCTCCTCCGCAGCCTGCTGCAGGGCCTT10.5No Hit
CTCTGCCTCCCGGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGAGTAAC10.5No Hit
CCCAAGGTATATGTGGAAGGGAGGGGCCCCGGCCCCAAGTTAGCAGCTGG10.5No Hit
CTCTTTACCCAACTCACCGCACCCATGGCAGTGATTCTCTTTACCCAACT10.5No Hit
GGAGTGAGTCTGGAAGGTGACAGAGCACAGCTAGGGCAAGACTTAAGGGA10.5No Hit
GCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCC10.5No Hit
TGCCAGGGCCATGTCAGACACAGATTGGCCAGAAACCTTCCTGCTGAGCC10.5No Hit
GAGCTGGGTGAGCGCACCGTCCCTGTGGAACTGCGCCAGCTCCTCCCGGT10.5No Hit
ATGCAAGTCCTTGACCACAGAATCAGATCACACAGTCACCTTTCCTTCCA10.5No Hit
GGCAGGGGCTGGGTGCAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAG10.5No Hit
CCCCCATGTCCATCTAATTTATTGTTGTTGTTGTTGCAGAAACTGGGTCT10.5No Hit

[OK]Adapter Content

Adapter graph