FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003674646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003674646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCTCCTCCATGGTCTGGAAGCGGCCATGGCCAAACTTGGAGGTGGTGT42.0No Hit
CTCTGGAACAAGAAAGATGACTGGGGAGGAAACACAGGTCAGCATGGGAA31.5No Hit
GTGCTGGCCGGGCCCCACTTTCAGAGGGGGCGGAAGGGCATCTTGACACG31.5No Hit
GCCTACCCTGGCCACTGACATGGGTACTATGCAGGAAAGAATTACCACTA31.5No Hit
ACCCAATCTAGATCTCTCCCCCTTGCTCTCCCCTTAGAAAAAGCTGTTTA31.5No Hit
ATCCTGGTGTCGCCATGGGCCGCCGCCCCGCCCGTTGTTACCGGTATTGT21.0No Hit
GTCATAGTCCGCCTAGAAGCATTTGCGGTGGACGATGGAGGGGCCGGACT21.0No Hit
GCACCACCTCGTTGCTGCCTGCCCCGGCCCGGTCTCCCCCTGTACCCCGG21.0No Hit
GCCCAGGCTGGAGTGCAGTGGCATGATCTCTCGGCTCACTGCAACCTCCG21.0No Hit
GACCAGGGGTTTGTTTTCAAAGTTGCCCGGAAGGCCTAGCAGGGCCCCTA21.0No Hit
GTGTAAATTAACACAACAGATGCCGGAACAGCAACATCGACTGTGAACTT21.0No Hit
TCTTTGCACCCCCTTAAGTGGTGACTTTTCCCCGGGCCAGTGGGCGAGCC21.0No Hit
GGGATGCACAGCTCAGAAGGCACCACCCGTGGTGGGGGGAAGATGTCCCC21.0No Hit
GCTGTACACGGGCCGGCGGGGTCGGGGCGCCTTCTGCAATGGCCAGCGGC21.0No Hit
CTGAGGGGGTGTGTTCCCCAATCTTCAGCACACAACGCCACTTGGCGAAG21.0No Hit
CATATCCGCTTACCCAGCAGAACACCACCTTCCTCATCCTGACTCCTCCC21.0No Hit
GTACTCTACAATGGGTGGGTACGGGAATCATTGCTGACAACTGGGCATGC21.0No Hit
GCTCTCCAGCGCTGCCCATTCCACCGCGTCCTCCTCCCCGCCCACCTCTG21.0No Hit
GGGTAGGCACACGCTGAGCGAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC21.0No Hit
GGACGAGGGTACCGGGCTGCTGCTGCTGTCCGGCCCGTAGTCGCCGCCGC21.0No Hit
CCTCCCTTCCCCCCGTCGAGTCATTTGGTGACTTTGATGGGGGGATTTCT21.0No Hit
GTCCTACATGAGGCGGCAGGCAGCCCTGGGGGTCAAGAGGAAGTAACTGA21.0No Hit
GGGCCAGATGGTATACCCATCATGCGCTGGCACCACCGGACCACGGTCAG21.0No Hit
AGGAACGGGTGGGCGTCTGTCTGCCTCCAGGTCATGGCAGTGCAGGCGGT21.0No Hit
GGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC21.0Clontech Universal Primer Mix Long (96% over 25bp)
CCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC21.0No Hit
CCACCATGCCCAGCTAATTTTTGTATTTTTAGTACAGATGGGGTTTCATC21.0No Hit
TCTCAGATCCGCAAGGATGCTCTCCGGGCGCTCAACTTTGCGTACACGGT21.0No Hit
CCTCGGGCCCGACCCGCCAGGAAAGACTGAGGCCGCGGCCTGCCCCGCCC21.0No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG21.0No Hit
GTATCAACGCAGAGTAATGGACCCTTCTGGTTGAAGGAATGCAGCCATTC21.0No Hit
TCTGTAACCTTCACAAATCCTTCGTTTTCTTCCTTTAAGGGAGTATCAGT21.0No Hit
GGGTATGGTTGTCACGCAGGGCAGCCAGAGAGAGCAGGAAGGCCCGCATG21.0No Hit
CCTGCCACCATGCCCAGCTAATTTTTGTATTTTCAGTAGAGACGGGGTTT21.0No Hit
CTCTGGGTCTCTGTCCCATGTCTCTGGGTCTCTGTCCCTCTCTCTCTGGG21.0No Hit
GAGCTCCACCACCACCGGGGCACAGTCCTCAGGTTCTGCAGCAAAGTCCC21.0No Hit
CAGACTCAGGACACTGAGCTTGTGGAGACCAGACCAGCAGGAGATAGAAC21.0No Hit
CATTTGGCTGCATCTTGAATTATGCCGACTCCAGACTTCTCCTCCTTTTT21.0No Hit
CTTCTTGTTTGTTGCTGATATCGTGGTCCAAATGGTTTTAACCTAATGGC21.0No Hit
GTACATGGGTGCGCCGGAAGCGGTCCGAGAATGAAGAGTGTGATCTACCA21.0No Hit
CTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAAC21.0No Hit
GCGGCGGCTTCTGCAGGTGGTGGAGGAGCCCCAGGCCCTGGCAGCCTTCC10.5No Hit
CTCCTGGACGCAGAGGCCCTGCCCTTGCCAGACGGCGCAGACATGTCAGA10.5No Hit
CAACATAACTACATTCTCAACATTGTCAAACCATTTCAAAGTGAAACCAT10.5No Hit
CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAA10.5No Hit
CAGCAGTAGTAACGAAGGAATAGCCACGCTCAGTCAGGATCTTCATGAGG10.5No Hit
CCCCTGCTCCACTGGCCCTTCGACCAGTCCTCCCTTCTGTTCTCTCTTTC10.5No Hit
ACCTTGACCTTCATCGACAAGAACGGAGAGACTGAGCTGTGCATGGAAGG10.5No Hit
GGTTAATAGTGGGGGGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCAT10.5No Hit
TCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTTTC10.5No Hit
GGAGGAAGAAGAACTAAGAAGGAAGAGAAGAAGGAGAAGGAGAAGAAAAG10.5No Hit
GGACAGAGGAGGTAACAGAAGGCAAAGGCCAGTTTCCCCGTTATCATGAA10.5No Hit
GGTCCGATCAATTAGTCTAGTGTGCGTTATTCAGATCGAGTGAGTACATG10.5No Hit
TCCTCACCGAGCGCGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATC10.5No Hit
CATCCGCAAAGACCTGTACGCCAACACAGTGCTGTCTGGCGGCACCACCA10.5No Hit
GTCCTGGGTTGTCAGCAAAAGCCCGGTCGAAGGCCTTGATGTGCTTGAAC10.5No Hit
GCATGTGGCCCTCCAGCTGGTCCCAGGGGAGATGCGGGGACAGGGGACAG10.5No Hit
GGCAAGAAGGGGCCCAAGGGCAAGAAGGGGGAGCCAGGCCTCCCAGGCCC10.5No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC10.5No Hit
GTCCAGCCACCAGTTGGAAAATCAAACTGGGTATCAAGAAAGAGCTCAGG10.5No Hit
GGTCGTACGTGTGCAGTGCGACGTTGTGATGTACGCCCCATGTAACCACA10.5No Hit
GGGCAGTGGAGAGTACACAGCAGAGGAACTGTGCATCAGGGCTGCACAGG10.5No Hit
GGTCATATACCTCTTGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTCAT10.5No Hit
GGTGTGAGCCGCTGCGCCTGGCCCTTGGTTCACTTTAATACACAAAACAG10.5No Hit
GTGGGACCTGGCGCAGTCCGCCAACCTCACGGACAAGGAGCTGGAGGCGT10.5No Hit
GTCCCAGCCTTGACTTCCTTGTTCTGTTATGTGTGTTGACTGGGAAGAAT10.5No Hit
GGTCCAACGTTTGAGTCCTCTCACGGCACCGTTTTAGTTCTGCATTTAGG10.5No Hit
TATCAACGCAGAGTACATGGGGAGTCCCGGGCGGGCCGTCGCGGGAGAGA10.5No Hit
GGATTGGGGAGCCCAGGAGGCAGCCTTCCCTTTTGCCTTAAGTCACCCAT10.5No Hit
CTACTGCATCCGCTGGGTGTGCACCCCGCGAGCCTCCTGCTGCTCATTGT10.5No Hit
GTGTTGGGATTACAGGTGTGAGCCACCACGCCCGGCCTGTGAAGGGCAAG10.5No Hit
GGGCTCTCGAAGTCTCACCTGTCTTTTGTTTCTTTACAGGTTTTTCTGGA10.5No Hit
CCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCCATGCAT10.5No Hit
GTTGCCAACAACGTACCCCCCGCCGCCACCAGCCTCATTGACCTATGGCC10.5No Hit
GGTCAGGCACGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCTGA10.5No Hit
GATCATACCTACTTTCCTGCCTTTTTGATAAGTAAGGCATGAAATGAAAC10.5No Hit
AGTTAATAGTTCTCCTTCATCTGTTTTTGTATTTTGTGTAGCATCTCCTG10.5No Hit
TCACAGAGCTCTCCTGGAAGGACTCCTGGGTCATGCTTTGCCACTCTGAC10.5No Hit
TGTCCGACCAGGTGGAGGCTTTGTCCCTAATTTCCAGCTCTTTGAGAAAG10.5No Hit
AGCTTATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCATCGGCTCCCAG10.5No Hit
CATCCGGACAGAACCCATGACTTGCTTCTAACCAAAAGAATATGGCAAAC10.5No Hit
GGAGATGTGAGTTTGATGTATAAGCCCCTGACTGGGACTGCTGCCTTTCT10.5No Hit
GCGGTGAACTGGGTAAAGAGAATCACTGCCATGGGTGCGGTGAGTTGGGT10.5No Hit
GCTGGGTACAGGCCGGACAGACAGAAAGCAGTCCCAGCTCAAGGCAGAAG10.5No Hit
GTGCTGGCCGGGACCCACTTTCAGAGGGGGCGGAAGGGCATCTTGACACG10.5No Hit
CCATCTCCTCAACAAGAACAACGTCAGGAGAGCACACACAAGAAGCAAAT10.5No Hit
CGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGAC10.5No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC10.5No Hit
AACCTCTACTTACCCACAGTACATACACACTCTTTAATCCATCCAAGTTG10.5No Hit
GCTTGTGTCTGCGCTGTCCGGGGTCCTAGGAGACCGCGCCAATCCCGACC10.5No Hit
GTGCTGGGGCTGACAGGCTCCAAACAGGCATGCGAGGTGCCTTTGGAAAG10.5No Hit
TACACACACTCAGGCTTCAGATCTTGTTGAAAGCTGCGATATCGACACTC10.5No Hit
ATTGGAGGCAGAGAGGCATGCAGGCGGGGTCCTAGGAGCCCCTGCTTCTC10.5No Hit
CTCCTGAATGTCTCCCTCGAAAGTCTTTTCCCCAAGGTCCTGGGTCCCCA10.5No Hit
CGGTGGCGGTGGCGTAGCCGCGCAGCGGGGCGGCTTCCATGGCTTCGGGC10.5No Hit
GTGGACTCCGCGGGCCTTCGGCAGATGCAGGCCTGGGGTAGTCTCCTTTC10.5No Hit
GTCCCACTCCATCCTACTCTGTTGCCACGTACTATAGTCTGAATGTCTGT10.5No Hit
GGCTCATTGCCTGTAATCTCAGCTCTTGGCGGGGCCAAGGCAGGCTGATT10.5No Hit
CCATGTCCTGAGCTTGTGCTGCGTCAGGAGAGCACACACTTGCAGCTCAT10.5No Hit
ATAGGAAGGAGAGACCCCAAATCCTTTAGCCAATGAGTGGTGGGGTCATC10.5No Hit
GGGCTTCCCTGACCCCATAGTGGCAGCTCCATCTCAGCTTTTGGTCGGTT10.5No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCT10.5No Hit
CCCAAAGTGTTGGGATTAGAGGCGTGAGCCACCGCACCTAGCCATTTTTT10.5No Hit
TACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGAT10.5No Hit
CGCTGAGTCTGCTCTTTAATGGACACCGCCCACTTGTCTGCACCTGACTG10.5No Hit
GGTTGACTTCGTCGTCTTTCGGGGTTGCCTTGCCTTTCGGCCTTTCTGGG10.5No Hit
TCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGAACGAGGTT10.5No Hit
GTAGAGAAGTCTTTCATGGTCATTACCTCCTAGGATATCACATTCTGCTT10.5No Hit
GGCCCATAGGCAGCACCCTGCAAAAAAAAAATGATCTACGTGTGAGGAGA10.5No Hit
CGGTGAGGATCTTCATGAGGTAGTCAGTCAGGTCCCGGCCAGCCAGGTCC10.5No Hit
GTCATGTCCTCATCAATCATTACACTACGGCTATTGAGTGCATGTCGTGG10.5No Hit
CTCCCAGGCTGGAGGTGGTTGTGGAGCTGCTCTGCCTGAGTCTTCAGATG10.5No Hit
CTTCTGCCCCCTCGAGTGCCAGCTCACCCATGTCTCCAGCCAGCTTCCTC10.5No Hit
GTGTGGCTTATTTTTATTAATGGCTGCCTAAGATTCCATGGTGTGAGTGT10.5No Hit
GTGTGCCCCCTGGAATGGCCTGCTCATGGACCGGCTTAAACAGAAGTACC10.5No Hit
GGGCTACCTTATCAAGGACGGCAAGCTGATCAAGAACAATGCCTCCACTG10.5No Hit
GCCCCGCGGTGGCTGCAGCTGCCTCTACTTTTTGTAGTTGCCAAACTGGA10.5No Hit
GATCTGGGACATGATCACATTCTCCCGACAGTCAGCTGAGAGGTTTTCAC10.5No Hit
AGACAGCACTGTGTTGGCGTACAGGTCTTTGCGGATGTCCACGTCACACT10.5No Hit
TTCCAGATGTCCTTGGGGGGCGTCACTATGGAAGGACCTTGCTCGCAGGT10.5No Hit
ACACCACGCAGATGGGCATCTGGTCCTCCTCGCAGTACAGCTTCAGGGGC10.5No Hit
GCCGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCGCCTGCCC10.5No Hit
AAACGAGCCACATCAGTGCTGCCCAGTTTTTCTGTAATGCCAAATCTAGG10.5No Hit
GCCCCAGGGGAAGGTGCCTATGCAAGGTAACTGCAAGTACCTGTAAGGTG10.5No Hit
TGTGGAAACTGACCAGGGATGAGACCAACTATGGAATTCCACAGCGTGCT10.5No Hit
CTTCAAACCTCCATGATGCTGCTTACATGTCTCGATCCCACTTAACTATC10.5No Hit
CGGTGGCGGTGGCGTAGCCGCGCAGCGTGGCGGCTTCCATGGCTTCGGGC10.5No Hit
GTCTTCCCAAGCCTCACTTCTTCACCTTGGCATCGTAGGTGCCTGCATTC10.5No Hit
CCCCTAGGGACCTGGACCCTCATCCCCTGACCCTCCCCAATCTGGTGATT10.5No Hit
GCGCAGAGCCAGGCAGCGCAGGTATAGCCAGGCTGGAGAAAAGAAGCTGC10.5No Hit
GTCCAAGGGAGCTCACTTATCACGTTCCACCATGTGAGGACACAGCAGAT10.5No Hit
CCCCACTTCTCCTCAAGGTTTGAGGGATTGCGGGGAGGGGGTCAGCTGAC10.5No Hit
GGCTACCCCCATGCCACCCATGACCTGGAGGGACCACCTCTAGATGCCTA10.5No Hit
TCTCCATTTCCTGAACTCAGGTGATCCGCCCTGAGCCTCAGCCTTCCAAA10.5No Hit
GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG10.5No Hit
GAGGAATAGGTACCAAGAAAAAAAACGAACCTTTGGGTTCCAGAGCTGTA10.5No Hit
ACTGTGAAGTGAATAAATCCTGCTTTGAAAGACTTCCAGAACAACATTAC10.5No Hit
CAGTAAGTAGGTGATCCTGCATTTCAGGTAAGCGGTAGGTGGAAATCCAG10.5No Hit
GTCCATCAGTTGTCCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTT10.5No Hit
GCCCGGGACTTCTTGCTGCGGTTGGCAACTGCGGAAGAGCTAAGACATCG10.5No Hit
GTCACTGACCGCCTGGCCATCCAGTTTGGCAACTACAAAAAGTAGAGGCA10.5No Hit
ATGTCAACACTGGCTGGGCGTGCTGGCTCACACCTGAAATCCTAGCACTT10.5No Hit
GGTTGTGCTTTTATATCTGCCTGAAACTGTTCTAGGTGGCTCCTGTAGCA10.5No Hit
TGTAAGTGCAACTTGAGTTTAAGTTGCACTGCTCCATACCTCTAATAAAC10.5No Hit
CCCTCACCCTGAGATGGGAGCCATCTTCCCAGCCCACCATCCCCATCGTG10.5No Hit
GGCCTGATGGGAAGGGCATGAATCCTCCTTCGTATTATACCCAGCCAGCG10.5No Hit
ACGAAGCACAGAGCAAAAGAGGAATCCTGACCCTGAAGTACCCGATAGAA10.5No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC10.5No Hit
GCCCAAGGTCACAGTGCATCAGCGGAGGAGCTGGGATCTGCGTCCAGGTC10.5No Hit
CAACATAACTACAGTCTCAACATTGTCAAACCATTTCACAGTGACACCAT10.5No Hit
GGCCTGGCCTCCGGGCATTGGTGGTTTCCCTGATCCTCTCTCCCAAATTT10.5No Hit
GCATTGTACAGGTGCTTCTCAAAGCGTGGAACCTTGCAGGCCTTCAGGGC10.5No Hit
AAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAAC10.5No Hit

[OK]Adapter Content

Adapter graph