FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003675281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTAGTGCAGGCAGCTTCCACAGCAATGGCATCCTGGTCATCCAGCGG29.090909090909092No Hit
GTTACTCACACCAGACCCATGTCTGACCCAAGTTGTTTATTTCTGTTTTA29.090909090909092No Hit
CTCCAACTGCCGAATGCCGTTGGACAGCAGCAAGCCCAGGGCGCTGAGCA29.090909090909092No Hit
CGATTTCATGCCGGGGTGCCTGAAACTCAAATCTCTACGGTGCGCGGGCC29.090909090909092No Hit
GTGCCAAGCGCGCCGGGCATAGCCCAATGTCATCAACTTTGGAAATTATC29.090909090909092No Hit
GCTTGGAGGTAAAGGTGAACTCACCGGTGGTGGCACGGATATGGTGTGCG29.090909090909092No Hit
ATCTCATTCTGCGGACTGAACCTAAATCGCTTGGTCTGTTGCTCTTTGGG14.545454545454546No Hit
GTACTGATCCAATCGTTCTCTTTCTGATCCGCAAGAACCAAGTGCCAGCA14.545454545454546No Hit
CATCATGAATGGTGTTCTTACCCGTATTACCGACATTAGAAGAGAGGTAC14.545454545454546No Hit
ATCCCAAGGGGCTGGATTTCGGCGCGAGGATCGGCACGCGCACGCCCGAG14.545454545454546No Hit
ACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGC14.545454545454546No Hit
TCCCGGCTTCCAACTGGTGCCTCTGACGGGTTTGCCGATCGCCGACCGCG14.545454545454546No Hit
GCGTACCAATATGCCGAGCTTCGGCAAACGCACGCCGTTTACCGACGAGC14.545454545454546No Hit
CTCGGGAGACCTCACCCCGGCGCAGCAGCTCATACAAGCAAGATGCGACC14.545454545454546No Hit
CTTCGGCGAGTGGTCCATACCACCCCTTGAACATGAGCACTCACTGTGGA14.545454545454546No Hit
TGGTGGCGCTGTTGCCAACATTACGCTGGCTACGTCGGAAAGCTGGCGCG14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)