FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003675282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAGCCCCTGCAAGAACGGACCCCATGGCGGGTAAGAGCCGCCCTTCC29.090909090909092No Hit
ATGTCGCAGAGTATGCCGGTGTCTCTTATCAGACCGTTTCCCGCGTGGTG29.090909090909092No Hit
ACCTACGACACCTACATCGTGCCGGGCCTGGCCTGCATGATCCTGCTGTT29.090909090909092No Hit
CTCAATGGCATGCTGCTGGAAGTATCGGCCGGCATCATCCGCGCCGTGGC29.090909090909092No Hit
GTATAGGTAGTCAAAAGGGCTTCTCCCATGCACTGATTTGAGCGCTAATT29.090909090909092No Hit
ATACAAGACTCTAACACAGATATCAACACAGCGGAATACTATATCTACGA29.090909090909092No Hit
ATATTGGTCAGTCTCTAAAAGATTCTAGACAAGCACTAGCTTTGCTGGCA14.545454545454546No Hit
GGGCGTTAGATGAGGTATCCGACCCGGTCAGGAATACCCCCAGCCAGCCG14.545454545454546No Hit
GTCCAAGCATTACGGCGCAAGGCATTGACGCAGGTAAAAAGAAAATCACC14.545454545454546No Hit
CTTCGAGGTGGCCGGGCTGCGCGCCGCCTTGCAGTTCGAACGCAAAGACG14.545454545454546No Hit
ACTTCCCTCACGCTCGATCACGCCCACCACCAGATGCGCTTTCATCTCGG14.545454545454546No Hit
GCCAGGTGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGT14.545454545454546No Hit
CGCATAAGCAGCGCGGCAACCGGCAGGGACGCGATCGGGAGCATGAGGGA14.545454545454546No Hit
ATATAGACCTGCGACCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAG14.545454545454546No Hit
CTTTACCATCTGAGCCACCTGGGAAGCCCCCAAAGAGCAACAGACCAAGC14.545454545454546No Hit
GGTCCAAGCAGCACTTGGCCGTTCGCTGACCCGAACGGATCTGGTGCGCC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)