FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003675283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTCAGTACCACACTGGTGCTTTTTATCCAGCGCGATCACCTGCATTT213.333333333333334No Hit
GGTTGAGGATGGCCCCATGCCCTCGGGCCTTCATGGCCCGTCCTGCTGCT213.333333333333334No Hit
GGCCATGGGTGTTTCTTTGGTGATCCATCCGAAAAACCCGAATGTCCCGA213.333333333333334No Hit
ATTCCATTCCATTCCATTTCATTCCATTCCATTCCATTGCAATCGAGTTG213.333333333333334No Hit
GTCTTCGATACCGGCTTCGCGCATTGCGCTTACTTGCTCGTAGTCGGCTT16.666666666666667No Hit
GTCTGGATTAATGTCACCTTGCCATCTCTAGGTAGCTCCCTATGTTAGTC16.666666666666667No Hit
ATCCAGCACAAGCTTTCGCACATGCGCGACAAGGAAACGTCCACGCGCAC16.666666666666667No Hit
GCCCAGGAGGCCTCCTTGCTCGGGTTGATGGTCAGGCCGTATTTCTCGCC16.666666666666667No Hit
GTCTACTCGTACGATGCGGGGGCCACAACCTGGCAAGCCCAGGTCTTGGC16.666666666666667No Hit
ATCAAGAGCACAAGTTGTCAACTGCAATTGTATTTGTTTTTGTTGAAGTC16.666666666666667No Hit
ACCCGAGGCATGCCTCATTGCGCCCTGACAGGTCCACAAACGACAAACCC16.666666666666667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)