FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003675700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCACGGGTTGATCTCATGTCTGATCGTATCTGCCCAGCTGGTTGGTGGC310.344827586206897No Hit
ACAAGAACGTGCACCTCACCGACGCGCGGCTGATGCGCGTCATCTCCGCG26.896551724137931No Hit
CGCCGGCGCCGCGGCTGATCTACGTCACCCCGTCCCACCAGTACCCCACG26.896551724137931No Hit
GTGTTTTTCGCCGGTTATGGGCGTCGGATCATGCCTGCGAGCGCGGGGCG13.4482758620689653No Hit
CAGTCTCACCGTCCATCGCGAACAGGCGCAGCCCCTGTCTCTTATACACA13.4482758620689653No Hit
ACCTGTTGCGGATAGTGGCCCTGACCGAGGCCGGACTACAAGCCCTTATA13.4482758620689653No Hit
GATTACGAGGGCGCGACGCCTTACGTGGACCCCGTCGACGCGCGCTTCGG13.4482758620689653No Hit
TCCTCTTTGCCACTTCTTACACTTGATATCGACGCCTCCGATCCACGATG13.4482758620689653No Hit
CTAAAAGGAAGTTCGCATGATCTAGATGAGCTGCTGGTCGAGTCAGCTAA13.4482758620689653No Hit
ATCCGCCACAGGTGACGAAACCCACCTTGACCGCGTCCTCCGCGGATGGT13.4482758620689653No Hit
ATTATCAAGGAGGATACCGAGGCCTGTGGAGTGGCCTGCACAAGAGAGGT13.4482758620689653No Hit
CCCCTTGTCAGGTCGAGTCGCCAATCGTCTGCATCTTCGTCCCAGACCAG13.4482758620689653No Hit
GCATCACACAAAAGAATCTCTCGGATTATTAGCAAAAAGCCGATGTTTTT13.4482758620689653No Hit
CCCTTGTACGCCTTCGGCCGAGGCTTGTTTTTCTCAGCAATAGTCGCCTT13.4482758620689653No Hit
GGCAAGGGGCTCGGCGGCAAGCCATTCCCGCTGTTCAAGCACTTCTACGG13.4482758620689653No Hit
GAGAAGGGCCCGATCCGCGACGCCGTCCTCCTCAACGCGGCCGCGGGCCT13.4482758620689653No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13.4482758620689653No Hit
CGTTGCGGCCGACCAGGTGCTGGTACAGCCCCTGCAGGGCGAACTCGCGC13.4482758620689653No Hit
ACACCGCCCACCGCGCCCGCTACGCCCAGCGCCCAGCTGCGCCGCTCGGG13.4482758620689653No Hit
GGCCACGGTGATGTGGGCCAACAGTGAGGTCGGCTCCGTTCAGCCGATCC13.4482758620689653No Hit
AGAGTACTCCGCGATCGCTTCGTCGTTCTTGTCGACTGACCACAATGCAA13.4482758620689653No Hit
GGTGGCGATGGTGGCCTTTTTCCTCGGCAACTCGTTGATGTTTATTTTCG13.4482758620689653No Hit
GGCCCTTCTCCCCCGCCAGCAGAGCGCGGACGAGGGTCGCGTTGTAGGCG13.4482758620689653No Hit
GCGGCGATCACGTCGGGGTTCACGACCAGCGCGAGAGTGGGATAAAATAC13.4482758620689653No Hit
CACTCCCCGCCGGGTCGATCAGCAGCAGGCGCATCGACCGATCCACCATC13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)