FastQCFastQC Report
Tue 10 May 2022
EGAF00003675771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85917
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC1390.1617840473945785No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1310.15247273531431496No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1140.132686197143755No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)