FastQCFastQC Report
Tue 10 May 2022
EGAF00003675912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19154
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA18719.768194632974836No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT13757.178657199540566No Hit
GTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGACCG610.3184713375796179No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA570.29758797118095437No Hit
GTACATGGGAGGGCAGCAGGGTGGCTGCGACCACGATGGACGCCGCCACC500.2610420799832933No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGT370.19317113918763706No Hit
GTACATGGGAGCGTGGTCAGCGTCATCGACCAGTGGTAGAGCGCGAGGTT350.1827294559883053No Hit
GTACATGGGTGTCCATCGTGAATCCGGACCAGTACAACCGATACAAGCAA310.16184608958964183No Hit
GCTTCAGCCTGCGCCTGCGCAATGCCGAGAAGTCGGTGACCGACGAGCGC300.15662524798997599No Hit
GTACATGGGGACGTGGCCGCGAGGATGACGGCCGAGGGCATTCCCGACAC300.15662524798997599No Hit
CACTCACACACACACACACACACACACACACACACACACACACACACACA290.1514044063903101No Hit
GTATCAACGCAGAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAG290.1514044063903101No Hit
GTACATGGGCGTCGATCATCTGGCCGTGCTGCAGCGTGTGGCGGTGGTCG290.1514044063903101No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTT270.14096272319097838No Hit
TATCAACGCAGAGTACATGGGCTTCAGCCTGCGCCTGCGCAATGCCGAGA260.13574188159131254No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGT240.12530019839198078No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA230.12007935679231492No Hit
TTCTTAGCCTTCCCACTCCCGCCCTCTCTCAAGCTCCGGTGCCCACAAGC230.12007935679231492No Hit
CACACACACACACACACACACACACACACACACACACACACACACACAAA220.11485851519264906No Hit
GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT210.10963767359298318No Hit
CCACCACGACGACCCTGGCCTCCACGCCGTGCGAGCCGCCGCCCAGCGTC210.10963767359298318No Hit
GTACATGGGGCCGCCGAGCGCCAGCCCCTGCGCGAAGCGCAGGACCGCAA210.10963767359298318No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)