FastQCFastQC Report
Tue 10 May 2022
EGAF00003675924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155969
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCTATAGAGCTCACACCCATACTCCCAGCTGGGACCCAGCCTTCCCTG2540.16285287460969808No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG2000.12823060992889615No Hit
GTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGG1750.1122017836877841No Hit
GTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTG1710.10963717148920618No Hit
GTTGGGGATCTTCAGCTTCTAAATGCTAATTACACAGTGAGCTTTGGGCT1650.1057902531913393No Hit
GTACATGGGAGAGTCACTCCTGCCTTCACCATGAAGTCCAGCGGCCTCTT1640.10514910014169483No Hit
CCCTCACCCTGGTCACACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAG1610.10322564099276138No Hit
TCGATACACTGGTCGATTGGGACAGGGAAGACGATGTGGTTTTCAGGGAG1570.10066102879418347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)