FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003675946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003675946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCAACGAGCGCACGGCGGTCGTGCTGCGGGATCTGGACCTGCTCACCA214.285714285714285No Hit
GTCCTGAAGAGGTCGATCTCGACGGGAAGTTGCCGACGTGCCCTGGTAAG214.285714285714285No Hit
GTAACTGCGACAGTGGCGTTGACCACCGTGTTCTCAGCAGTTCCGGCTGG17.142857142857142No Hit
GACGGGACTTTGCCACCGTTGACTACCGTCCTTACAGCATCAATTCAAAC17.142857142857142No Hit
TTTCCAGTGTGCGTCCTCGACGGGAGTAACCCATCTGCGTGCTGGTTATG17.142857142857142No Hit
CTAATGTCCTGAATTCGGGTCACATCAGTGGTCTGGTTCGTATCATTGCG17.142857142857142No Hit
ACCCATCGCGGCGGCCGCAAGGCTGAAGGCGCCGGCGACGGGGACGACCC17.142857142857142No Hit
ATCAAGGACAAGAAAGAACGCGAGGAAAAAGAAGCAGAGGAGGCGGCTGT17.142857142857142No Hit
GCCCAGTGGTATTTTCCGGCCTCGTCTTGCACGTTGAACTGTGTGATCGA17.142857142857142No Hit
ACAACATGCCCAGTGCCCACCGCAATATTCGCCCGCCGTGAAAGCTAATG17.142857142857142No Hit
CCTTTCGTTCGGCATAAGTCGCCTGTTGGCTTGTGCCGAACAGAATGTGA17.142857142857142No Hit
GACTTTGCCTTGATTTCGGTGATTTCCGTAGTTTAAGCGCCGGAGATCGC17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)