FastQCFastQC Report
Tue 10 May 2022
EGAF00003676030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411357
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC5350.1300573467815061No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT4930.11984723731454673No Hit
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG4640.11279739982545575No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA4200.10210109466959355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)