FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGTGGACAGCGCATGAAAAGGCTTGGGCAAATGCTCTGCCAACGCAAA325.0No Hit
CTTCTGTGCCAGGGTGAAGCCCTTGCCGCTGTCGACCGGTGCCTGGGGCA216.666666666666664No Hit
CATTGAGACGACAACCGCTGCCGAGCCATTTTCCGACTTGCACCATCGAG18.333333333333332No Hit
TCCCAATTCAGATCACTCGAGTCGTATAACTAACTCAGATCGCCATAAAA18.333333333333332No Hit
GGCTTAGAGACGAACAGGCGAGGATGCTAGCTTTGATGCCGATGGTCCCG18.333333333333332No Hit
GGGTGTACACCGCCACCAACCTGGAAGAAGCCCTGTCCAACCGGCAGCGC18.333333333333332No Hit
CCGCTGGCCCTCGGTGCCTCGCCCCCGCGCTACAGCCGCAGTCCAGCGGG18.333333333333332No Hit
ATCCAGGGGCTGTTCAGCGGATTGATGCGGACCCAGAATCCGGTTGAGCC18.333333333333332No Hit
GCCTGACCGAGCCCGGCGCGGGCTCTGATGCCGCCTCGCTCAAAACCCGG18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)