FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003676514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTCGGTCGTGCGAAACGAGCCGAGTCGACGTGAAATACAGCTATGAC47.2727272727272725No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT35.454545454545454No Hit
CGATAGCGGGATTTACTCGTTCTGGGATTATCAGGCTGGTGCCTGGCAGA35.454545454545454No Hit
AATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCAAAAAGAGCTCCTAA23.6363636363636362No Hit
AGGCTGGAGTGCAGTGGCATGATCTCGACTCACTGCAACCTCCATCTCTG23.6363636363636362No Hit
GGTTCTCTATGGTGAAGATGGCAACTTGCTGACTCAGTCTCAGAATGCGT11.8181818181818181No Hit
CTCTGTTGCAGGTGGCCTGCATTCTTGAGACTTGAAACCCTTCCATCTCT11.8181818181818181No Hit
TAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCC11.8181818181818181No Hit
GGATGAAGCCCTACAAATAGGATTAGTGCCGTTAGTGCCCTTATAAGGAA11.8181818181818181No Hit
GGGTGAATCAGATGTTTAGCTGGTCATTGAAGGCACAACTGTGCTGCTGA11.8181818181818181No Hit
GCTGGTGATTTCCGGTTATGCCGCAGCCTACGCGGTGTTCCTCATCACCG11.8181818181818181No Hit
GGGCACAGACAAACAAAAGACAGCAATAACCTCTGCAGACTTGAATGTCC11.8181818181818181No Hit
GTTCAGGACCGTACCCGCAGCGACACCGTCGTTGACCTTCACCTCGTGGT11.8181818181818181No Hit
CGCGCGCGGCGTGCCGGTGGGTGTGGACTGCATCTCGGGCGTGACCTTGG11.8181818181818181No Hit
CTTTTAAAAGGGACAGAGAAAAAGGTTTTTCCAGATAGCCATCTGCCAGA11.8181818181818181No Hit
GAGTTCCCGTGTTTTGCTTTCACCTCGTCGAGCACGACAAGTTCGAAGCC11.8181818181818181No Hit
GTTCCACAGGATGCGCTCGATCTCGTCCGGCGACAGCCGGTTCAGCAACG11.8181818181818181No Hit
TTCCACAACCACTGAACATCCTGGATAGGCTTGGCATGCTCTTGGATCTC11.8181818181818181No Hit
TTTCACATATGCAACGCTCTTTGACTGACACCGTCACTCATGTCCGCGAA11.8181818181818181No Hit
GGGCTACCATGCCAGCGATGTCTTCCGAACGGGTGATGGCCAGGCGCTTG11.8181818181818181No Hit
GCAGAGATCATCTGCTTGCCAAGTGACGCCCACAACCGACCGTGCGCGTA11.8181818181818181No Hit
CATAAGAAGCTTCTGGAAAGTCTAAAAAGGTCTGTCTATCACACTGCCAA11.8181818181818181No Hit
AAGTGGGCATGCGATAGGTCATGGAAGGTGTTCCCTTGAATGTTGACTAC11.8181818181818181No Hit
GTCACCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCC11.8181818181818181No Hit
GACTTAGCTTTGTACCCAGGCTGCTCCACTTACTGGCTGTGTGAACTTAA11.8181818181818181No Hit
CAGGTCTGATAATCCTGGGGAAAGACCAGGAAACTCCCATCTGTTTAAGA11.8181818181818181No Hit
TTCCCTTCTCCATGTGGCAGACAAACCTCAACTCCTCCCTCCAAGTCCGT11.8181818181818181No Hit
GAGGATATTTCCTACTTCACCATAGGCCATAAGGGGCTCACAAATATCCC11.8181818181818181No Hit
CTAATCAACTAACCTTGAGATGGGGAGATTATCCTGGCCCAATGTAATTA11.8181818181818181No Hit
GTTCAGGTGGTCGGTGGCGACGTCCCAGGTGTTTGTCGGCAGGTCGACCA11.8181818181818181No Hit
CTTTTCCAACGTAGGCCTGAAAGCGCTCCAAATGTCCACTTCCATATACT11.8181818181818181No Hit
TCCTTGTACCTCTTATAGAATTCATCTGTAAATTCCCCTGGTCCTAGACT11.8181818181818181No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA11.8181818181818181No Hit
GTGGCACACGATCACTGTGCACTGTGGCCTCAAATTCCTGGGCTCAATCA11.8181818181818181No Hit
GAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCCCGTCTCTACAAAAA11.8181818181818181No Hit
GAATGGAATGGAATTAACCCGAATACAATGGAATGGAATGGAATGGAACG11.8181818181818181No Hit
GCGCCAGCGCGTGTCGCTGTCGTACCTCGAACTGCTGTTCGGCAAGCTGC11.8181818181818181No Hit
ATCTAGACTGAAGAAACAACTAGTCTATGAACACAACTTTATTGCGTTAG11.8181818181818181No Hit
GGAGGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGG11.8181818181818181No Hit
ACTCTCGCAAGATCGCCGGATTCCTGCTCGACTTTTATGACAACGAGGTC11.8181818181818181No Hit
GCAATAGAGTTGAATAGAATGGAATGCAATGAAATGGAAGGAAGTGGAAT11.8181818181818181No Hit
GGTGACGTTCGATGGCTTGGAAGGACAGTGGTGACGTTCGATGGCTTGGA11.8181818181818181No Hit
GAGGTTTCCCGTGTTGTGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGG11.8181818181818181No Hit
TCGCCGGCCAGATCATCGAGCCCGTGCTCATCGACTCCTCGTGCCGAAGC11.8181818181818181No Hit
GTGGTGTGTTGCCCCACTTCGGGTCCTCAGATGTGTAGCAAGCGGCCAGC11.8181818181818181No Hit
CAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCT11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)