FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAAGTACCATGAAAAACTGGTCCTTCAAATGAAAGGGGGAAAATTGAG211.11111111111111No Hit
CCATCATCCTCTCCGTGGGCGAGGAAGATGAGGTCTCCATCAAGGAGGCA211.11111111111111No Hit
CCTCCAGGAAGCCCTCCCGACGCCCCGGCTGAGCCAGTCGTTTCCGAGTT211.11111111111111No Hit
GCGCCACTGCGTCCACAGGCGCAGCCACTGCACGGGGCCATAGAGCAGGG211.11111111111111No Hit
GCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCTAAATCCACCTT15.555555555555555No Hit
ATCCAGGCGGCTCGGGCCTGCTTTGAACACTCTAATTTTTCCAAAGTAAA15.555555555555555No Hit
GTGCTGGAGAGCGTGGCCCGTATCGTGAAGGTGCAGCTCCCTGCATATCT15.555555555555555No Hit
GTCCCAGTGCATGCTGGGACTGTTCTTCGGCTTCCTCTTGGTGATATTCG15.555555555555555No Hit
GAATGAAGCCTCCTATGATGGCAAATACAGCTCCTATTGATAGGACATAG15.555555555555555No Hit
GGTAAAGGACGATCAATGTATAGATCCTTTGGTTCAAGGATCAGTTCCAC15.555555555555555No Hit
GTGTTCGTGCCAACAGCACAGCGGTACACTCCTTCTCTAACCCAGTTTGT15.555555555555555No Hit
TACCTCTGGGGAACCCGCTGCAGAGGACGAGGGAGACACCGCTTGGAACT15.555555555555555No Hit
GACTATGTGTGAGCTTTTTTTAAATAGAGGGATTGACTCGGATTTGAGTG15.555555555555555No Hit
GTACTGTAATCTACAATAAGTCCACTTCTGCCTCTGCCACTACTGCTGCC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)