FastQCFastQC Report
Tue 10 May 2022
EGAF00003676803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9742
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGACTGCGATAGGAATCATGTCTGGTCGCGGCAAAGGCGGAAA230.23609115171422707No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT180.18476698829809074No Hit
GCCATACAGAGTGCGCCCCTGACGTTTCAGGGCATATACTACATCCATGG160.1642373229316362No Hit
GTATAGGTGACGGCGTCTCGAATAACGTTCTCTAAGAAAACCTTAAGCAC150.15397249024840895No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT150.15397249024840895No Hit
GTACATGGGAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCG120.12317799219872716No Hit
GTACATGGGAGTCCGAGCGCCGCGCTGGGGAGAGCGGGTGTTTGAAGGCT110.11291315951549989No Hit
TATCAACGCAGAGTACATGGGACTGCGATAGGAATCATGTCTGGTCGCGG110.11291315951549989No Hit
GTACATGGGCCTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCC110.11291315951549989No Hit
CTCCAGAAGAGGAGAAGAGGAAACACAAGAAGAAACGCCTGGTGCAGAGC110.11291315951549989No Hit
TTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGTACT110.11291315951549989No Hit
GTACATGGGTCCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCC110.11291315951549989No Hit
GTGTTTATTGAGATGGTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGT100.10264832683227264No Hit
GTATCAACGCAGAGTACATGGGCCCGCCCCTCCGGCTAGCTCGCTGGCTC100.10264832683227264No Hit
GTACATGGGAGCCCCGCGGAAGAGCAGAACGTTTGGGAGTGTGCAGCTCC100.10264832683227264No Hit
TACTACATCCATGGCTGTGACAGTTTTGCGCTTGGCGTGCTCCGTATAGG100.10264832683227264No Hit
GTACATGGGGAGACCAAGGGCTAAAGCTGGGAGACTGAAAAAATGCAGAC100.10264832683227264No Hit

[OK]Adapter Content

Adapter graph