FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCACAGCCGCCTGGTAGAGGCTCAACCGACAGCGCAAATCCGGCCCCG318.75No Hit
ACCCTGCCCAGTGGCGCGCTCCCGAAGACTGCGCCGCCTTCTTGGACGAA212.5No Hit
TCCTTGTTGACGGCATCAACAAGATTCCGCGCCGTCTCAGCTACAGCTTC16.25No Hit
TTACCGGAGGCGAGCCGCTGATGTTCCCCGGCATCGGCGCGCTTCTGAAA16.25No Hit
GCAGAAGGTGCGCGTGAGCGGGCCTTCGTCGATGGTCAGAGGAGCCGTGG16.25No Hit
CTCNCGCACCGCCTGCTGAGCTTCCACGACGGACCGCGCGCGCTCACCGT16.25No Hit
TCCTTGTTGACGGCATCAACACGATTCCGCGCCGTCTCAGCTACAGCTTC16.25No Hit
CCAAGCAACCGGTCGACATCAATGGAGCCATGAATACTCTCACCTCGCTG16.25No Hit
ACCCGCACATGATGAGCGCCGAGCGCCAGCAATGGCTGCTGGACAATCTC16.25No Hit
GTCTCCACATCAGCGCTTAAGGACTGAGCGTCTTCCCAGCGCGCCGCGAC16.25No Hit
GCCCACCCCATCGAGCTTGGGTGGCGTCACCGGCACCAGCACCGCGCCCG16.25No Hit
ATCCAGCCAACCCAGCGCGGATCAGCGAGTTCTGCGGCCAGGATGGCGTC16.25No Hit
CCCCGGTACTGCTCCCACCGCACGGTCGGGCAGTTTTGAGTTCGGGCGGT16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)