FastQCFastQC Report
Tue 10 May 2022
EGAF00003676820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7452
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT410.5501878690284487No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT260.3488996242619431No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT260.3488996242619431No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT180.24154589371980675No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA140.1878690284487386No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG140.1878690284487386No Hit
GTACATGGGAGTGCGGCTCTGGGCTGGCCGAAGGGGTGGCGCTGCGATCC130.17444981213097155No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA130.17444981213097155No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA110.14761137949543748No Hit
GTCCTGTAGGATCCTCTCCTGCCAGCGTTGGGGCTCCCCGTGGAGTGACC110.14761137949543748No Hit
TCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGC100.13419216317767044No Hit
GTACATGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATC100.13419216317767044No Hit
GTCTTGAGCAGCGCGGCAGGCACCATGTTCCTGACTGCGCTCCTCTGGCG90.12077294685990338No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA90.12077294685990338No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.12077294685990338No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG90.12077294685990338No Hit
GTACATGGGAGAGCGCGCGAGCCCGGGGCGGGCGGGGCGCGTCCCGGAGG80.10735373054213634No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG80.10735373054213634No Hit
GTACATGGGAGAACGGAGCGGACGCCATGGCGACCAACATCGAGCAGATT80.10735373054213634No Hit
GTACATGGGAGAGCTCGGCGGCTGGGACTGGAGGACAGCGGTGGCGGAGG80.10735373054213634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)