FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGTGGCCTCCCCGTACTGTACTCATCCCCACCTGTTGTGTTCTGGGGC27.6923076923076925No Hit
GTACGACGGCTCCGGTGAGATCGTCGACCCGATCGACTTCTCGGGTGGCC27.6923076923076925No Hit
GATTACCGGCGATGTTCGCGATGCCGGACACCACGTCCGAAAGGCTAAGC27.6923076923076925No Hit
AAGAGAGAGAGAGACAGATAAAGAGACAGACGGAGAAAGACAGAGATGGA13.8461538461538463No Hit
GGATGATGCTGTGTGCCGCGACAGCGGTGGATCCGCAACGTATAGTTCGT13.8461538461538463No Hit
GAGGTTGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCTGTCTC13.8461538461538463No Hit
CGTCTACGAGTCAAGTTCAGTGTAACTCGGCCGCACTGTAGCAAGCTGAG13.8461538461538463No Hit
CTGCGCTCCCTCGCCTTTCAGGTTGAGCGGGCTGGGCAGGCTTCTCCGCG13.8461538461538463No Hit
GAATTTGTAGTGTCGAACGTTAACATTAAGCCCCTTGAGGACAAGATCCT13.8461538461538463No Hit
GGCCAAAGTCCACCGGATCGAGCACCACGGCGAGTACTTCAAGACCCCGG13.8461538461538463No Hit
AGTACGCGTGCTCCGCTTAATAGTAGCGCTCTATATACTAACGGTAGGTT13.8461538461538463No Hit
AAACAAGGTGGTTACCTTTTCCATTTGTTCCACGGGCTGCTACAACTAAA13.8461538461538463No Hit
GCTTCCGCGGCGAGCGCATCGAGGCGACGGTGCAGCTCTCGCCCCGCGGC13.8461538461538463No Hit
TCGACACCATCGTCTTCACCGGTTCCACCCGGGTCGCCAAGCAGCTGCTG13.8461538461538463No Hit
CCCTGGTGGGCGACGACAACAACCTTTGGAAGGCGCTCCCCGGCTACTTC13.8461538461538463No Hit
GCAGAAATGAAAATGCCCGGGGCAGCCCGGGCATTTTTACTTTGAACCAG13.8461538461538463No Hit
ACCACACGATGCGCGAGCTGGCCGATCAGCTCGACGCCGACCAGGAGCTG13.8461538461538463No Hit
GCGCAAAGTCGGCCGCGGTGTCGAGGTTGGGAATCTCGATCGCTCCCTGC13.8461538461538463No Hit
GTTCCTCCACCCGGCGCAGGTCGGCCTCGGCGCGGCGCGCCTGCGCTTCG13.8461538461538463No Hit
CACCTACGAGCGCATGATGGACCAGATGGCGCTGACCTACCCGACCACCA13.8461538461538463No Hit
TGTTTTGGCTCAGGCTGATTGCGTTGGTACTTGTCTGGATGAACTGTCCA13.8461538461538463No Hit
GTCGAGCCCATCCGGTCGCGCAGCGCGAGTTGGGTCATGCCCCAGGTGAT13.8461538461538463No Hit
GGGTAAGCCTTAAAAAAAAACTTCTCTAGAGGTTTCAGTTTTCAGGAAGG13.8461538461538463No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)