FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACTGGCCAGCATCACTCGCTGGGCGGTAGCCGACTCGCCGCGGAACG27.6923076923076925No Hit
GCCGGCGTACCTGCCAACGCGGACGCCTATCCGAAACTTGGGGTGAGCGT27.6923076923076925No Hit
TAAACGTACTGTATTCGTGCGGAGGTGGGAGGAGGTGCCGTAGGGCGTGC27.6923076923076925No Hit
GGCCATCAATCAATGGCGGGTAGGACCAGAATCCAGACTCTGGCATTGAT13.8461538461538463No Hit
ATGTTAAACTCGGCGTACACTACCTAAACACCAAACACCAAAAGGTGTGG13.8461538461538463No Hit
CTTATCTTGCGCTGTGGCTGATCGAGCGGGCGCAGGGGACCTGCATGGCC13.8461538461538463No Hit
GTTGAGCGTGGTGGTCGGGTAGGTCAGCGCCATCTGGTCCATCATGCGCT13.8461538461538463No Hit
GAACGAACCGGGAAGGCTCCGCGGCTTCGCCGAGTGCGAACGCAACATTG13.8461538461538463No Hit
GATTCCATCTGAGGAGGACGACAGTCATGGGCGGCATCATCTGGGTCATC13.8461538461538463No Hit
AGATGGAGATTCGCTCTTGTTGCCCATGCTGGAGCGCAATGGCACGATCT13.8461538461538463No Hit
GGATGACCTGCCGCTGCTGGCGGACCGGTTCGCGCTGAAGCCGTCCCCTC13.8461538461538463No Hit
GATGAACACCGCTTCAGCGTGCTTGCCGGCGAAGTCCCGCCCGCGGGTGG13.8461538461538463No Hit
TCCCGACCCAGCGCCTGGAGCAGGCGCGCGCCGAACTGGCCACGCGCCGC13.8461538461538463No Hit
GTCTGTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTGTTGGGGTGTTTGT13.8461538461538463No Hit
TCCGCGCACCAGCGCGCCTTGCCGACCTGGCGCTTGTTCACGTGCAGGCT13.8461538461538463No Hit
GTCAGATACCTCTCGTGGGCGTGGCGGTAGGCATCCGCCAGCTCCTGGTC13.8461538461538463No Hit
TCCATAGGAACGCGCTCACCCTTCTCATCGAAGCGGCCAGCACCCACAGC13.8461538461538463No Hit
CTGTAGCCGCTCTCGGAGAGCAGCCTCTTGGCCGCGTCCAGGTCCCGCTT13.8461538461538463No Hit
CCCTTGAGGGCCTCGACCACCAGCGGCAGGAATTCTTCCTTGATGGAGCG13.8461538461538463No Hit
CACCGGGGCTCTTGTCTGTCGCTCTTCCTAGGGCCTTTCACCAGGGGGTA13.8461538461538463No Hit
GAAAGCTGTAACAACATTCGACGACCGTCGCGAGAACCGGTAAAGTATTA13.8461538461538463No Hit
GTCTATCTACGAGCGCGAAGACGACGACAACGACACCCTTGCGCCGGACG13.8461538461538463No Hit
TCACAAAGATGGCTGATATATTCTTCATCGTCCTGATCTATCTGTATCCA13.8461538461538463No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)