FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGGCTGGGTCCTTCTCAATATGCTCGCGGTACTCGTCGAGGGTAG323.076923076923077No Hit
CTGCACCCACTGCTCGACCCAGTCGCCGAGTTCGCGGCCGGAGGCCTCGG215.384615384615385No Hit
GTCTCCGGCGGGCAGGAGGAGCGGCAGGCGATGCGCGACCTGGCCTCCGC17.6923076923076925No Hit
CTGTCAGACCCGACCGCGAGTCCAACTTCGATTTGGCCTGCTCGGATAGC17.6923076923076925No Hit
ATATTACCGATGAGTATGACACCGTTGAACCGTCTGATCTGGCTCACGTC17.6923076923076925No Hit
ACTTCTGGCGGAAGGACCTTCAAGCGCGGCGCTCGTTTCCAGCCCGGTGA17.6923076923076925No Hit
GGTCTGTGGCTCGTGTGTTCGCATGTATGTAGCAGCATCAATAAGGTACA17.6923076923076925No Hit
CTCTTAAATCACATGAAAAACACATACAAGTTGTGCTGTGGGGACTCACA17.6923076923076925No Hit
GGGTGGAGCGGACGGCGCTGACGCCGTTCGGCAGGGTCCTCAAGGACCAC17.6923076923076925No Hit
GTTTGCGATCACCCAACTCCGCCAGATATTTGTAGGCGAACCAAGACGCC17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)