FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTCCCGTGCCAGGGTGCGATCTTTCCTGCACCCCTGTATACGGTAGCT212.5No Hit
ATGACAGTCTTCATGCGTGCCGTCCACGAACACAAGCTTAAACGAGCCAA212.5No Hit
AGCTCGTACTCGTCGGGCATCCTGTCGTTCATCACCAGCTCCTGAACCGG16.25No Hit
ACCTCAAGAAACCGGTGGATCGACACCGCCCGCCTTGCAGTAGGTCGTCG16.25No Hit
GAGACAGACCCGGGACCTCATCGCCTCCTGCCGCCCGTGCCCGGTGCCCG16.25No Hit
GTCCGGAGTCGCCCGCGGACAGTCACACCACGCCGGTCGTCCAGCCCCGC16.25No Hit
ACCGGAACCAGTGGCACCAGCGACCAGCAGATGGGGCATCTTGGCCACGT16.25No Hit
GGTCGCACAATGGCGCGGTCATTTGTCTCGGGCGAACGGACCGGCAGATT16.25No Hit
GATTGTGGTTATTCCCGTGATGATGCACCCAACGCTGCCCGCGAAACTTA16.25No Hit
TCCCCCGGGTCTGTGTCCTCGCAGGCCTGGGCGCCGCGCGCGTGCGCCGC16.25No Hit
CTCAAGATTGTATTCTTCGAGGACTGTGATCTCCGGCCTAGAAGGATAGG16.25No Hit
ACCATGCATCATCAGGAGTACGGATAAAATGCTTGATGGTCGGAAGTGGC16.25No Hit
GATTGTGGTTATTCCCGTGATGATGCACCCAACGCTGCCCGCGAAACGTA16.25No Hit
GTAAAGGGTCGCACGGGAGCTCGCTCTTGGCGCAGGGGAACGGGCGCTGG16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)