FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003676980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATACGCAGCAAGTCGCCACATCCGTGCAGCATGTGGCGTTCTGTGCT212.5No Hit
ATCGACGCCGATGCGCTTGCGGCGAACGACAGGCTGCGTTTGCGCAGGCC212.5No Hit
TTTTAGCGGCTTGGTGCCGCTCTTAACATTTGCGCGTATTATACTGCTTT212.5No Hit
TCGTACGCCCCGCTAACGAGCTGCACAGGTCTACCCCCTCATCGAACAAT16.25No Hit
GATCTTTTTTGGTGTGGCGTTGGGCTTCGTCGTTGAGCGTCCTCATCCTA16.25No Hit
CTGCTAGAGCACAGGCCGACGATACTGAACTTGCCTGTAGATCTATTCCT16.25No Hit
TTTTGCGGCCGCGGTCGGCTCATACGAGAAGTTGAGAGTCGACATGGATC16.25No Hit
GGCAATCAGGTGCGACAATCTATCGCTTGTATGGGAAGCCCGATGCGCCA16.25No Hit
GTGAGATGCTGAGCTCGATCAGTAGCCGAGCACCGGCCAGCACCGATGCC16.25No Hit
GGGCGATTTTGGCTCGGAAAGTCTCGATGTCGATATTCTGAGGAAGAACA16.25No Hit
ACTCCACCCGCTCACGCACCTCCTCATAGAGGCTGCGCGCCGCATCCACC16.25No Hit
TCGCTTACGCTGTTGCTTCCCCCGACGTGCGTATCCTGTCGCCGATTCCT16.25No Hit
GCTTGTCCCTTGGCGTAGCCGCGCCGAGGTGACCCGTCACAGTCCTGCCG16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)