FastQCFastQC Report
Tue 10 May 2022
EGAF00003676984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003676984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441230
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA5130.11626589307164065No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT4930.11173310971602111No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG4690.10629376968927769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)