FastQCFastQC Report
Tue 10 May 2022
EGAF00003677047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences268091
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTC4760.17755165223748653No Hit
ATTCTAAGCAGAGTATGTAAATTGGAAGTTAACTTATGCACGCTTAACTA3630.13540178521472185No Hit
GTACATGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTC2800.10444214837499208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)