FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATGATCTCGCGGACGAAGTCGTAGTCGGTCTGGCTCGCGGCGGGGAAG34.3478260869565215No Hit
GGTGTGGGGCTTAGGGTCCGATGTGGCGATGGGGCTACCGCCCCGGTGGT34.3478260869565215No Hit
GGAAGCGGCGGTTCCGCGGGCGACAGCACGAACGGTTCCGGCGGTGAAAT34.3478260869565215No Hit
CGGGTGATCCGCGTGGGCAGCCGACGATCCAGCCGGTATTCGTCGTCTAG34.3478260869565215No Hit
TTGGTAGACCACATCCAAGGGACGATGAGGTTTCCCAGAGGAGGAGTGGT22.898550724637681No Hit
AGCCGATTGGATTATGACTTGATTGGGAAAAACCCGAAGGTCTTTTGCGG22.898550724637681No Hit
CGGGACGAACTGATCGCCCGCACCCTCGGCAAGCGCCTCGGCCTGACGTT22.898550724637681No Hit
GGCCACCACCCTGATCCTCGTGACGAACACGGTGGCGGGCCGGCAGTGGA22.898550724637681No Hit
ACGTTGAACCACTTGCCCGACATGTTGAGCGCCATGCCGTGCGTGAGGTG22.898550724637681No Hit
ATGTTGAACAGCTCATTGATGACCTTGCCAACCCGGGCATATCGGGGGGC22.898550724637681No Hit
ATCGCGTAGACCGCCGCGGCGGCCAGCGCGCCGCCGAGGAAGCCCTGTCT22.898550724637681No Hit
AGTTTCTCCAGCAGCTCGCTGCGACTGCGCCATCACCACAGGAAGAACCT22.898550724637681No Hit
TTACACGTCCTATACAATTTGAACAATTCAAAGCGGAACTTGCAAAAATA22.898550724637681No Hit
CTCCGCGACCAGCCGACGAAGAAATGGAGAAGGCGATCCGGGCGATGGAA11.4492753623188406No Hit
GCTTCGGCCCTCGTCCGCTGGAGGTCGCCGACTACACCGCCTGGATTGCG11.4492753623188406No Hit
CGATATTAGTCCAACGTAACGGTGCACCCGAGGGACATTGGTATAGCGGC11.4492753623188406No Hit
GGGAAGCGGATGAAGCGGTGGAAATCGGACCGCCTCCGGTCGCCCAGAGT11.4492753623188406No Hit
GCACGAGCTGCTTCGCGGCTGGGAGCATTCTGCATCCGGTCAACCAGAGT11.4492753623188406No Hit
ACCATATTGAAAGAGGACCGGTTCACGATATCGAAATGATGCCCGTTTGG11.4492753623188406No Hit
AGCTGGAACAGTACGCTCCGGCTGAGGGCATCAACGGATTGGCTGTGCCC11.4492753623188406No Hit
GAACATCGACCCGGAGGTCTTCTCCCAGCTCGGTGTGTGGGTGATGAGCC11.4492753623188406No Hit
AGGATCACCTGGTCGACGGCCGTGCTCACGGTGCCCGGGTCGAGGCCGGC11.4492753623188406No Hit
CGTCCGGTCACCACGCAGCCGCAGCTTGACCAGGGCCAGACTCTCCACGC11.4492753623188406No Hit
CATGCCGGTCGGCGGATTCCAGCGCGTCGGCATAGCGCACGTTGATCTCG11.4492753623188406No Hit
GCCTGGTAGAGCCTCCGGTGCTGGTCCAGGAGTTCGTCGGCGCGCGCCGG11.4492753623188406No Hit
ATAAAAAAACACCCCAACAGCCGGGGTTTGAACTAGGAGACATCCAAGTT11.4492753623188406No Hit
CCTCAAGGGAATTCGCGGTGGTCGGGAAGTCGAATCCCCACACCTCATGT11.4492753623188406No Hit
ATCCAGGAGGCGTTACAAGCCTTTCCTGCTTGTAACGCCTCCTGGATAGC11.4492753623188406No Hit
GTGCTGGAATGTATGCAGGAACAAGCTCTCTGTACAGCAATCATACAAAA11.4492753623188406No Hit
AGCTGGAACAGTTCGCTCCGGCTGAGGGCATCAACGGATTGGCTGTGCCC11.4492753623188406No Hit
CCTTCCACCTCCGAGGCTATCGAGGTCTTCCGCGAAAAGGGAATCCACTT11.4492753623188406No Hit
GTACAAGGTAAAGTAGCATTAGTGACAGGTGGAGCTTCAGGTATTATTGG11.4492753623188406No Hit
GGACAGGGGAGCTTATACAAAAAGCATTGAATGATGGCTGTCGAAAGTTC11.4492753623188406No Hit
GTCGCGTGGTGCAGGCTGCCGTTGCGGCAGCCCGGGATGCAGTGGCCGCC11.4492753623188406No Hit
GCGGCTCGGCCTTGGCGCGCGCCGCGACGTCGGCCGGGACCTGGCCGGTC11.4492753623188406No Hit
GGCTCCGGCCGCACCCCAGCCGGCCGCCGCGGCGCCGGCCCAGCCGGCCG11.4492753623188406No Hit
AAACCTGCTCCATCTGGTGGGGCAGCTGCCGGAACAGGCGACGTGGACGG11.4492753623188406No Hit
CTTTTAAAGGGCTAAGAGGTCGTACATTTCATTCCTCGCCATGATATAGA11.4492753623188406No Hit
GTAGAGGTGATCGTCGGCAAGCAAGATTTGGCCGAGGTGCAGGTCGCCGT11.4492753623188406No Hit
GGAAACGGGAACGGGAAAGGAACTTTTTGCCCAAGCGATCCATGGTTTGA11.4492753623188406No Hit
AGATAGGACAAGAGCAACATGCCCAAAACATGAAATACCGGACTGGCTGT11.4492753623188406No Hit
CTATTATGATTGACTTCCCTGCCCCTGTTTCTCCTGTCAAGACCGTCAAG11.4492753623188406No Hit
ACGCAGGTCACCGTCGAGGAGCTCATGCGTCGCCGGCAGAAACGCGCCGC11.4492753623188406No Hit
GGGCGGTCAACGAGGTGCTGCGCGCCAAGGACGTGGAGGTGGTACACGGC11.4492753623188406No Hit
CGTGTCCACCGTGGCCGGTCCGCTCACGCCGGCGCCCCCCTTCGCCTGCT11.4492753623188406No Hit
CCCACATGCCGGTTGTGCCTAGCGTTGCTGTCGGCCAGGTAGTGGTTCCT11.4492753623188406No Hit
GTAGAAAGGCGCGCCGGGGTGATAATTAGCGGGCAGGCATGCTTGCCGAT11.4492753623188406No Hit
GGGCGCGAAGCCCGGCGAGGGCGGCCAGCTGCCGGGCAACAAGGTGTGGC11.4492753623188406No Hit
GGCCGGGATAATGTGATAAAATGGGTAGTAAGTGACGACGGGCGCGTCGA11.4492753623188406No Hit
ACATCGCCACATCCGTGAAACTCGAAGGCGTCTACAACCTGTTCAACGCA11.4492753623188406No Hit
CGGCCGAGTCGGCACGTCCCTTTGTCGAAAGGATGATCAAGAGCGACCAC11.4492753623188406No Hit
GTGCAGCGGCGTGCCCTTGAGGTTCAGGTCTACCTCCACCACCTTTTTGG11.4492753623188406No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)