FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCCATGGTGATATCCGTCGGTTTTTGTGGTAAACTATTGTCGGAATA32.912621359223301No Hit
CGACGAAGATCTCGCCGGGGCGTACCTCGAAGTTCGCGTCGATGACGGCG32.912621359223301No Hit
CACCCGCTGCGCCGACGGAGGTGTGGCGCCCGACACGCGCCACGAGTACC32.912621359223301No Hit
GGTATGAGCTGTACGGGTCCGCGTAATAGGTGAGCATGCCCGTCGACTCG32.912621359223301No Hit
CATATAGACGGGCCTTGGGGCTCTCATTTGACGACAAATCATCCAATGTC32.912621359223301No Hit
CCTCACCGATGCCGTAGTCGGCCAACCGCGCCGGGGCACCGAGTTCGCTC32.912621359223301No Hit
GGACGCGTTCTGCCGGGCGTTCCGCACCCGCGTGCGCTACCTGAAACCGC21.9417475728155338No Hit
GACATGAGCACTCCCTTGGGCGTGACGGCGGTGGCAAGGCAGAAAGCCCC21.9417475728155338No Hit
GTGCGCCCGCCACCTAACACGGTGCCGTTGCGCTTGGCCAGCCACAGGGA21.9417475728155338No Hit
GTCGGCTCGGCGGCCACCAGCAGCCGCGCGTCGCCCGCCACCGCCGTGAG21.9417475728155338No Hit
GCCTTCAGACGGGAGCGCGGGCGTCAGTGGCGCGGGTCAGGCGCCCGGGA21.9417475728155338No Hit
CAAGGAGACGATCGAGAACGCGATCGAACAGTGGTACGGCGAGGGGCGAC21.9417475728155338No Hit
TGACGAGGGTCGCCACCACCGGCACGACGTAGCCGATCTCGGCCACCGGG21.9417475728155338No Hit
CGATGGCGCGTCGCACGGTCGTCCAGTCACCGGCGCGTAGCGCGGCGCGT21.9417475728155338No Hit
AAATCCATGAACGAGCGGCGACTGCGGTACGGATGTGCCTGTTCGGTGAG21.9417475728155338No Hit
GTCCCCAGAAGGCGGACAGCCAGGCGAACCAGGCGGCCGACCGGACCAGC21.9417475728155338No Hit
CCACGCCCCAGAACAGCACCTTGTGCTGGTAGCCCGCCGGCACGCGGAAG21.9417475728155338No Hit
GGCGAGGACTTCGGCGTCGCCCTCCAATTCACCAACTACCGGTAAAGCCG21.9417475728155338No Hit
TCGGTGAGCAGCTGCGACACCGCCGCGGTGTTGCCCACCGCCGCGGCGGC21.9417475728155338No Hit
GGCGGTGACCAGCAGCACCGCGAACCACACCAGCACCATGGACGCGAGGA10.9708737864077669No Hit
GATCCATGGCCTGCACCACCGTGCTGTGCGGCCCCTCGGCGCGGACCACC10.9708737864077669No Hit
GGTCCGCTACGTGGACGCGCTGAGCCGGCACCGAGCCTCCCTCGACCTGG10.9708737864077669No Hit
CATTGACCCGACACGCCCAAGAAAACGGATGGGCCGCCAAAACCAAAGAG10.9708737864077669No Hit
AGATAGGGGCGTCCCAGATAGTAGTCCTCGAAGGCGGCAAGCTGCGCCTC10.9708737864077669No Hit
GTATCGGCCATTGAAGAACATGCCCGTGCAAAAATGATTGGACGCGTTTT10.9708737864077669No Hit
GCTGGAGATCAACATATCTGGTGGTTACCTGCGATGGGGTCAGGAGACAA10.9708737864077669No Hit
CCCTTGGCCTTGAACGTCGCCGCGAGCCCGGTGGCCCCGGCGGCGTTGGT10.9708737864077669No Hit
ATGTTGAACAGCTCATTGATGACCTTGCCAACCCGGGCATATCGGGGGGC10.9708737864077669No Hit
CTATTACACCGCCTACGACGACCTGGCGATATCGGCCCTTCGGCAACTTG10.9708737864077669No Hit
ACTCGGCCCCGGCCAGCGCGACGGGCTGATGACCGGGTACGTGGCCCGCT10.9708737864077669No Hit
CGTCGGGCGTGTCCCCCACAATGGTGATCACCACGTCGCTTCCCGCTGCC10.9708737864077669No Hit
GGTTGCCACCCCGCACCTGGGCGCCTCCACCCACGAGGCACAGGACAAGG10.9708737864077669No Hit
ATCCCGGGCAGAGGGCACCGGATCCGTGTTGGGGTGGGAGTGGACGACGC10.9708737864077669No Hit
AAGCAGCACTGACGCAGGCGCAAAGTCGAGTGCGCCCACGACGGCGTGCG10.9708737864077669No Hit
TCTCCCTGGTGGCGCTCGTCGGCGTCGGCCTGGTGATCACCCGCGGCAGC10.9708737864077669No Hit
GCGCCAGAGGGCGTGGAGCGGGTCGTTGGCGGTGAAGGCGAGGAACGCGG10.9708737864077669No Hit
CGGTGAAGGGCTGCACACCGGCTTCCCGACGGCGGCGAAGCGCCTCCACC10.9708737864077669No Hit
CCGACGCCGAACGCCGGAAGATCGCCCTCGACGTGGCCGACGAGCTGCTC10.9708737864077669No Hit
GCTGGCGCCCCCGTGGTGACCGCCCAGCGCAGCGTGGCGCCGGCGATCGC10.9708737864077669No Hit
TACGAGAAGTTGACGCCCGGCAAGGGCCAGTTCGACTACGTCCGGGCCAA10.9708737864077669No Hit
AGCGCGAACGCGACCTGATCCCCAAGGGAGTAACCCGTCCGCTCGATCGC10.9708737864077669No Hit
GCTATCGCGGTCGCTACATCGACGCCAACTCGGGTACCGGCAACGTCTTC10.9708737864077669No Hit
CGTCCGCAGCGTTATCTTGAGATCGGCACCTTTCAGGGAGGTTCAGCGCT10.9708737864077669No Hit
GTTTCCCGCAGCTCCTCCAGGGTGACACCCCCCGACCGGAGCAAAAGGGG10.9708737864077669No Hit
CCCTTGAAGATGTCCGAGCCCGGGAAAGTGGGGATGTTCGGCTTGCCCGA10.9708737864077669No Hit
GACAAAGGTGGCCCGGGAGTTGAAGTACCACTCCCCGAACACCGACCTCG10.9708737864077669No Hit
CATCTCAGATAGATTGCCAGATCCTGGGAATCAGAGAACGATTCACACTC10.9708737864077669No Hit
GCATAAATATCCCTTCTACGCGGCTCTCGCCGGCTCTGCTTTGGCGGCGG10.9708737864077669No Hit
GCAGGATCGAGGCCGGAAACCCCCAGCCGGTCATTGAATCCGCACGGGGA10.9708737864077669No Hit
TCGTAGACGCCGCCGCGCGCGTGCAGGGTCAGCCAGCTCTGCATGACCGG10.9708737864077669No Hit
CACACTAAATGCATGGAATGGCACTGGACTACTTAAGGCCCATTCTAATG10.9708737864077669No Hit
AGCTTGATGATGGGATACATGACCAGCTGGCCTGGCCCGTGCCACGTGAT10.9708737864077669No Hit
GCCCCACTGCTGGCCTCGCTCTTCCCGGCCGCCCGCGTGGATCCCCGTGC10.9708737864077669No Hit
CGGGCTGAGTGCGGGCTACTTCACTGGCAGCAGCGAAATGCGTGGCATCG10.9708737864077669No Hit
GCAGCGCGGCGCTCGCCGACCTGCGCCGCCTGGTGGCGGTGCTGCGCAAC10.9708737864077669No Hit
CAGTTCCGTTGCCGCGAAGTCCATCACCGAAGACAGCGTTTCCTTCCCGC10.9708737864077669No Hit
GGCGCACAGCATCGCCGTGGCGATGGTGGTGAAGTACCACATGAGGCTGC10.9708737864077669No Hit
TCTCGGCCCCGGCCCGCGCGACGGGCTGATGACCGGGTACGTGGCCCGCT10.9708737864077669No Hit
GCCGTGGCCTGCGCTCGTACGCCCGGTACTGGATGGAGGCGTTCCGGCTG10.9708737864077669No Hit
CCATATGACGATGTGTCAGCGGAACCCCCATGAGCTCGGGACCAGCTACG10.9708737864077669No Hit
GCATCAAGGTCATATCGTTTCCTTTAGGTGGGGTGTGGAGCTGGTGGTCA10.9708737864077669No Hit
GCGTCAAATCGAACGCAAAGGCTATATCGCCCGGGGCGGGCAGATCGTGG10.9708737864077669No Hit
GACCCTCTTAGTTCCGCTTCAACGCCTGAATCCGACCCGAGTCGGGCTGT10.9708737864077669No Hit
GGCCGGGATAATGTGATAAAATGGGTAGTAAGTGACGACGGGCGCGTCGA10.9708737864077669No Hit
ACGAGAAGGGCGACGAGGAGCTGATCTCCGAGGCCATGGAACGCGAGCTG10.9708737864077669No Hit
GCCCCAGGCGAGCAGGCACAGGATGACCAGGGTGAACGCCATCGAGTACG10.9708737864077669No Hit
CGCGCAGCCGGCGCTGGTAGAGCGTGTACGCCTCGGCGAGCGCCCGCTCG10.9708737864077669No Hit
ACCTCTCCCGCGGGATGAAGCAGCGGCTGGGATTGGCCCGCTGCCTGGTC10.9708737864077669No Hit
GGTGCGGCCATGCTGGTAAGCATTTTCACCTTTACTTTTTTCGACACTCG10.9708737864077669No Hit
CCCGCACCATCTCCCTAAAAAGGGAAAAATCCTGCTCCGACCGAATCGTC10.9708737864077669No Hit
GTCCGAGCTGTGGGAAATTCCGCTCATTCATACCGCGCACACCTTGGCCT10.9708737864077669No Hit
GAGCTTCGCATGGGCGCGTCGACAGGCACGCATGCGGGAGACGGTGCACC10.9708737864077669No Hit
GGTGTGGCGGGAGCTGCACGCGCGGCGGGTCCGCCGGGAGATGAACGCCG10.9708737864077669No Hit
GGCTCGCGATGCTCGCGTTCGGCCTGCTGATGCTGCTCTGGCAGTGGCTC10.9708737864077669No Hit
TCCCCGGTCGCTCCGGAGGTGGCCGGCGGCCGTCGCCGCGGCGGGGGAGA10.9708737864077669No Hit
GCCTCGCGTTGGAGAAGGCCGATCCGGCGCATGAGAAGTATCACGGCATC10.9708737864077669No Hit
CTTCTTCAAGGACGACGAAATCGTCGGCTAGACCGACGCGCCGACGAACG10.9708737864077669No Hit
GCATGAAATCCCGATCGGCTCGAAGGCGCGGGCATTGCCGATGTCCAGAC10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)