FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCTTCCAGAACGAGGACTGTGGCCCCGTGTGCTCACATTGCGTAGAT32.912621359223301No Hit
GTTCCACAATCCGCGCGGGACCGGCTGGATTTACGGCGATGACGCCGGTA32.912621359223301No Hit
ACCCAGGGCACGACCGGTCGGGAAGTGCTTTCAGCATCCGACTGAAAATA32.912621359223301No Hit
AAACTGGTGAACGATCTGGAAAACTACGAATACCGGGAAACCATCATGAT32.912621359223301No Hit
CGACCGCGGCCGCCGAGGCGCGCGTGTTCGGCGCGCTGCCGCCCGCGGCC32.912621359223301No Hit
AAACCAACGGTTCTGCGCATGGCACCTTTGCCCTTTGTCCGATGTGACGA32.912621359223301No Hit
GAAAGTAAGATGACAAAGGAAGGTGTTTGGAGTTGTAAACTGATCCGCCG21.9417475728155338No Hit
ACGGTGAACATCGGCACGAACAGCTGGGCCAGTGGGCCGATGGCGAGCGC21.9417475728155338No Hit
CCGCTGAGCGGCTGGCCCGCGCCCGCGCGCTGCGGCTGCGCCGCCGCGAC21.9417475728155338No Hit
ACGCACGGCACGTCGCAATTCGGAAGAAGCCCCATCCTGCGCAATCACGT21.9417475728155338No Hit
GTCCGTGGGTGACGAGTTCCCCACCTTCTCCCGGCTGGCCGACCCCCTGC21.9417475728155338No Hit
ACCTGCGGGAGAACGCCGCCTACTCGGACATCACCGACGGGATCAGCGAG21.9417475728155338No Hit
GGATTCCAGCATCGACTGGATCATGGGGCTGCAGGCACCGGTTGCCATGC21.9417475728155338No Hit
ACCACGGTCCGCTCGGTGGCCATGCGCACGGCCCGCTCGGCGACCTGCTC21.9417475728155338No Hit
ACATGCGACTGGTCACGTTCATCGACTCCGTCGGTATCAGCGCGATGGTC21.9417475728155338No Hit
GTGGCGCCGAACCCGTGCGACATCGAGACGGCGTACCACTGCGCGAAGGT21.9417475728155338No Hit
AGGCGACGTTGTCGGCGCCGGTCTGGGCGTGGGCCGCGGTGAGCGCGGTC21.9417475728155338No Hit
CATGTAGCCAGTGAATTTCGCCGACGCGCTCGGGAAACTCGACGAGGTGA21.9417475728155338No Hit
GACGACAAGCTGACCGCCGTCCGTCACCGCACGAAGGAGATCGTGACGCT21.9417475728155338No Hit
GGCTCGGCCAGGCCGCCGCCAGGTCGTCGGACGCCGGACAGACGTGACGT21.9417475728155338No Hit
ATCATGATCAGGGAATTTCCAAGATCGATTGCCTGCTGCATATTATGAGT10.9708737864077669No Hit
CCGGCGCGTGGCGCCTGGCAGGCCCCTGACCGTCGGTCGGTACGCCGCTG10.9708737864077669No Hit
GCCCTGCGCTGCGTCGCGGAGGTCTACGGGAACCTCAAGAAGCTGCTCTC10.9708737864077669No Hit
GGCCGTCCTCCGGGCGCCCGGCCGACGGCGGGGGCGTGGCGGGCCGAGTG10.9708737864077669No Hit
GTCTTCAGGCGCCGGATGAGCTTGTGCTTGCGATCGACACAGACCGAGAG10.9708737864077669No Hit
GGCCTGCACACGCACGAGCGCGCGCTGGAGGCTGGCGACAAGGTCGCCGG10.9708737864077669No Hit
GACCGGCTCCCACGGCGCGAGGAAGTCACGGTTGGCGCGGAGCACCTGGG10.9708737864077669No Hit
GAACTACACGTCGAATCGCAAGAACATCACTGCACCTGACGACATGACCG10.9708737864077669No Hit
AGATCAAACGCTTGTCCAGCTTTGGCGGCCACGGCTTGCAAGATTTCGGG10.9708737864077669No Hit
TTCGTAGACGCCCTCCGGCTTGAGTCGCTCGGCGACCGTGGTGATCGGCC10.9708737864077669No Hit
GGACAATCCCCATACCGACCAGGAACATCGGGATGTGTTCGACCATGATG10.9708737864077669No Hit
TTCCAGGCGAGCACCGCGATCACCGCGGCCACGATCACGGCGTACGCCAG10.9708737864077669No Hit
GATGGTGGCTCGCGAGCTGGATCTCGACCCGAAGCGCTACCCGGCGCGGG10.9708737864077669No Hit
AAGTACGGCCGGCCGCACTCGGCATCGACGTTGAGGCACGCACGTGCCAC10.9708737864077669No Hit
ATGAACAACAGTACTGAGATTATCCCGGACATGCTCTCAACTGACACTCA10.9708737864077669No Hit
ACCTCCACCCAGGCCGGGCGCTCGTCCGGGTCCTCGGCCACCTCGCCGCC10.9708737864077669No Hit
CACCGAGGGCGGCTACAACTACAACCCCTCCACCGGCGAGTTCCAGTACG10.9708737864077669No Hit
CCATTCAGAAATTCGCGACGAAGTTCGTCGACACAAGGACCGGTGTTCCG10.9708737864077669No Hit
GGTGTGAAGGTCATGCGCACGACCGCCAACGCCCTCGGGCTGTCGGCGAA10.9708737864077669No Hit
CTCGAAGGTGCCGGACTCGACGACGAACAGGTCGTCGCCGGCGGCGCCCT10.9708737864077669No Hit
GCACGGGCGTCGCCTCGAAGGCGGTGAAGTTCTCCACCGGCAGGTTGGCG10.9708737864077669No Hit
GCTATGTACATCGCATCGGTCGCACCGGACGGGCGGGTAGGACGGGAGTC10.9708737864077669No Hit
ACGTTGGCCAGACCCTCCTGGGTCAGCCGCAGGACCGCCAACCCGCGTAC10.9708737864077669No Hit
CCCACCACCCGCAGCCTGGCTGTGCTTCGCACCGGAAAACGTATCCAACG10.9708737864077669No Hit
GCGTGGCTGAGCCGCACGCCTGTACTCACAGTTGCTGACGAATGACGGGG10.9708737864077669No Hit
CACGTATACGCCATGGTTCGACGGATTCTGGCTCGCCGTCATTGCCACCG10.9708737864077669No Hit
GTCGGTGAGGTTGTTGCCCTCGACCGACAGCTCGAGCCACTCGGTCAGCT10.9708737864077669No Hit
GGCGGCGACCCCGCCGGCCACCGCCGTGAAGGCGCGCCCGAGCTTCTCGG10.9708737864077669No Hit
CGTAGTGACGCACCAGATCGCGGGTCTCCTCCGCAGTGTTGACCACGAGC10.9708737864077669No Hit
GTGGTGGGTGGCGGCGACTCTGCAGCAGCAGTCCGAGCGCTCGGCTTCGA10.9708737864077669No Hit
TAAGGGAACGGTGGCCCAAAAGGTGACCGCCGGACTGGATACGGTGGGAG10.9708737864077669No Hit
GCAGAGCGGTGGCTGATCATTGGAGTGGAAAGGTGGCGGTGAGATTTGAG10.9708737864077669No Hit
AGCCGGCGGGCCAGCGCGGCGGCGGCGTCGGCGCCGAAGTCGCCCCGGAC10.9708737864077669No Hit
GAACCGGACGGCATCCAAGATGGAAGAAGCGGCGAAGTGGGGGGCGGAAA10.9708737864077669No Hit
GGCTGGCACATGCCACGCCTCTGCAGGGCCGATGGTGGTATCCCAATAGC10.9708737864077669No Hit
GTAAATAACAACCCTTGGGCTGTACCTTCATACTTTACATCTTTATCTCA10.9708737864077669No Hit
CAATGTTTCGCACGCGGGTCACTCCCCTACGCTACCGCGTCCGGATCGGC10.9708737864077669No Hit
GTAACGCGACTCGATGTCATCGACTCGAGCCTTAGCCACCGCGTCAAGAG10.9708737864077669No Hit
ACCTGGTGATGGCCACGGGCATGTCGGGCAAGCCGAACATCCCCACTTTC10.9708737864077669No Hit
TCACCACCGCGTTCTGGGTGCGGCCGGACACCAAGGCCGGCTGGACCGGT10.9708737864077669No Hit
ATCCTGAGCTCCTCATTCTGGATGAGCTCAGGATCGTGGACCAGGCAGCG10.9708737864077669No Hit
AGCTGTTTGCCGACCCGTCCGAACTGGCCGAGATGATTGCCACCGTGGCA10.9708737864077669No Hit
CACCGTGACCACGGCATCCCCGATGCCGTGTCGTGGGCGACCCTCGCGGA10.9708737864077669No Hit
CCGGGAAGCTCGTGCCGACGCGGCCGCTGGCGAAGCGCAGCGTCACGAAG10.9708737864077669No Hit
ATATACAATAGATGAAAGAAACCGTTGGCCGACCCGGAACAAAAGGCTCA10.9708737864077669No Hit
CCTGGCGCAGGTCGCCGTCGTGTGAGTCGGCCACCTTTTTCTGCCGCTGA10.9708737864077669No Hit
GAAGGAGCAGGGCTTCGGGGTGCTGACCGAGATCGACATGCGGTCGACGC10.9708737864077669No Hit
CCGTGGCCGCTGGCGGTCGGCGGCCTCGGCGTCCTCGCCGCCGCGGCCGG10.9708737864077669No Hit
GGCTGCGAGGTCCGGCACGCCGGCGATCTGGTCTATGCCGACGGTCTGGA10.9708737864077669No Hit
CGGGATGGCCGAGACCGCGCAGCGGCTCTACGAGCGGATGGGCTTCGTCC10.9708737864077669No Hit
AACCGGGAGGATGTTATTCCCCGGGACGGAAGGGATAACGGCTACGAAAG10.9708737864077669No Hit
CCCCAGCATCTACACCGCGGGCAAGCGCACCCAGCCGGAGGACCGCCCCA10.9708737864077669No Hit
ACTCAGAACCGTCTGTTTCAACCGGGTGCTCCTTTTGGGCGGGGATTCGG10.9708737864077669No Hit
GCAAGTCGGCTTCCTTGCTTTCAGCCGTCACGATGGCGTGTTGGCTGATG10.9708737864077669No Hit
CCTTCGTTTTTGGCCGCGGTGGCGAGGAGTGGCAGGCCTGCGCTGCTGCT10.9708737864077669No Hit
CTTGGTGCTGGTGTCGACGAGGGTGCTGCCCGTCCTCTTATGCTTGCGCA10.9708737864077669No Hit
CCGCCGGGGCGACCCTGCTCGCGGCGCTCTGCACCCGGCCGCGCCGGCGC10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)