FastQCFastQC Report
Tue 10 May 2022
EGAF00003677319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1035359
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG14640.14140022929244833No Hit
GTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT14290.13801975932985563No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12100.11686767584963283No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)