FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGACGTCGAGATGCCGCCCGGCGACATCGAGCGCGCCCTCGGGGTGCT24.3478260869565215No Hit
GGCGGAGGACCTGGTCCTCTACCTCTTCGGCACGCCCGGCCAGCGGCGCT24.3478260869565215No Hit
CTAGCGAGCCTATCGGTTTGTCGGTTTGTCGATTTGATTTGGACTAAGGA24.3478260869565215No Hit
ACCCGCAGGGCCGCGTGGAGCACCACCTCACCCTCGTCGACGACGGCGAG24.3478260869565215No Hit
GACTTCCCCGAAAGCGAGATCATCGCCGAGATCTACGCCCAGGCCCTGGA12.1739130434782608No Hit
GTTCTCCATCTTTTCTTCGAGCATCGACTATTCCTCCTTTATGGCAGGGC12.1739130434782608No Hit
CCGGAGAGGTTAGCGATTTTCGCGTCCCAGTCCGGCAGACGTAGCGCATC12.1739130434782608No Hit
GTCTAGCTTCGAAGGCATAACAGCATATGATCCGGGTCTGTCCGCTCTGT12.1739130434782608No Hit
GGGGAGGACCCGGCCTCGCACCAGTACGTCGCTGGCAAGCATCGCGATTG12.1739130434782608No Hit
GAACTCCTTTCCCCGGCGGGAACGCTGCAAAATATGCGTTACGCTTTCGC12.1739130434782608No Hit
GCCAAAGAGCATGTGATACACCCCAAGGTTAGTGAAGCAGCCATGCACCC12.1739130434782608No Hit
TGCTCATCCTGCTGGTGCTGCCGTTTACCGGCGTGCGGTTCGGGCTGCTG12.1739130434782608No Hit
GCTCCCCCTGGATCGGCTCGCCGAGCGCACCGGGCCCCACCTCCACCTCG12.1739130434782608No Hit
GCCCTGACGGCAGACAAACTTCCCGGCGTGGCGCGCTTTGTGGTGTCGAC12.1739130434782608No Hit
CCCGCCGTCAGCTCGTCCTCCACCTGGCGCAGCGCGGGGATCGACGAGCG12.1739130434782608No Hit
CTGGCCTTCATTAATAAACAGCAGGAAGAGCCAGAGCATTTCCGTCTGGA12.1739130434782608No Hit
CTTCTGGTCTGGAGCGCGCTTTCGCATCAGGAATCTACGCTGGCCATTCG12.1739130434782608No Hit
TCCTTCACCAAACTGCGGGATCTGGAACGACACGGCGCCTTCGAAGGGGT12.1739130434782608No Hit
GCCGTTGAAGAACCACACCAGCGGACGGAACACGAACAGGCAGAAGCGCA12.1739130434782608No Hit
GAGCAGGGTTCGATTCCTGATATGGCCTCGCCGCTGAGGGCGTTTGCAGA12.1739130434782608No Hit
GCATCACGTCGATGTACGGAACGACGTTGATGTCGGCCTTGGCCCGTCGG12.1739130434782608No Hit
GTTCGACATCAGCCGCGCGCGGGCCATGGAGACCGGCCGCACGGTAGTGG12.1739130434782608No Hit
ATCCAGGACATGTTCCCGTACCCGTCGGGCTCCGGGCTGCACGTCGGACA12.1739130434782608No Hit
GAGATGGCCTCGGTAGGCAAGCGGGAACGCCGCGCCAGGGTCGACGAGGT12.1739130434782608No Hit
ATCTACTGGATCTTCGGATTCCTGCGGATGGGCACATCGGGCCTGGTGGC12.1739130434782608No Hit
ACCAGCGACAGCAGCACCGCGAAGGCTCGGTTCAGCGCGGCCGCGGACAG12.1739130434782608No Hit
GCTCAACATCCAGACTCTCGGTTACGACTACATCCAAGGCCCGATGGGCG12.1739130434782608No Hit
GAGTGGAAGAACGGGCCGAAGCGGAAGGTCTCCTGGGCCCCTGCCTGGGC12.1739130434782608No Hit
AATCAGCGTCGCGCGGAAGTTCTGCAGGAACAGATACATCACCAGGAAGA12.1739130434782608No Hit
CTCGGTGACCGCGACGAGCGCCATTTTTCCTTCCCTGACCAGGAAAACCT12.1739130434782608No Hit
GTAACCAAGGCATACATCCGTTGGAGGATCACATGACCACTACTGAAACA12.1739130434782608No Hit
GTCCTGGGCCGCCGAAGCCGCCCAGGTCGACATCAACGCGGGCCTCGCGC12.1739130434782608No Hit
GTCCCTAGCCCTCCAGCCCCGCTGCTGTCACGCTCTAGCGAAAGTCGATC12.1739130434782608No Hit
GAGGTGAACTCGGCATGTGCTCGGCCAACAAATTGATAGGAATCAGTTCC12.1739130434782608No Hit
CCGAGTGGCGCTGCACGGGCATCTGCCGCAGCGCCGAAAGGCACAGCGCA12.1739130434782608No Hit
GATTGGCACCAATTAGCATGGCTCGAGCCTTCGTGATGATTACCCCGCCA12.1739130434782608No Hit
TTGACCACCAGCGCAGGTATGAACCGGACCACTTCGCTCCACGGCCCACA12.1739130434782608No Hit
GATATAGACACTATGTTCATAGCGGCGCCAGACTCTCCCTCCCTACCTTT12.1739130434782608No Hit
TTATCGATGCAGTCTCGGTGACGCATGCAGAGATGCCAAGGGAAAGCATC12.1739130434782608No Hit
GTTACGGGGTGATGGCCGTTATGGGGCCATCACCGTGGGATCACACACCC12.1739130434782608No Hit
GTGTCCTGCAGCACCGTATTCCCTTCCAGGCTTTTACGCTGCTGTTCAAT12.1739130434782608No Hit
CGCCTCCGCCGTGCGCAGCGGGGTGTCGAGCTCGTGCATCTGGACCTCGG12.1739130434782608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)