FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTGCTCCGCGGCCATCCAGTCGAGGGTCTCGGGGCCGGGCCAGTAGC24.3478260869565215No Hit
TCCATGAATAGATAAAGGCGGCGAATCGCGAGTGTCGGGTGTTATGCATC24.3478260869565215No Hit
GCATGAGCGAGTATTCGGTGATCTTCACGAGCGCGCCCTTGGCCTGCTCG24.3478260869565215No Hit
CGGCAGGTCGGCCGGGGGTTCGGCCGTGCCCGGCGGGCCGCCGCGCAGGC24.3478260869565215No Hit
ACGCTGCGGGCGTCGGCGGGGTCTGAGGCCGACGGGGTGACGGCCACCCA12.1739130434782608No Hit
GCAATGAGTTCGCCGACGCCGACGGTCAGCCCGACGGCGCCACCGCCGCA12.1739130434782608No Hit
GACCACGATATCCACCTGACCGAGCGCATCTTTGCCATGGCCTTTGGCCG12.1739130434782608No Hit
TCACGGATGAACGTCTTCAGCTTGGCGTTGTGCGGCGCGATGTTAACCAC12.1739130434782608No Hit
GTCAGAAAACGACGTCGCGCTGCGTGAGTTTACCCGGCACCTGATTGCGC12.1739130434782608No Hit
GAGCAGCGTGTGACGTATTTGACAGATAACCTAAAATCCCTGGACCAGCT12.1739130434782608No Hit
CCAGCGCACCGTCTAGGACCGCCAGGCCCAGGCGCGGACCGTACGCCGCT12.1739130434782608No Hit
GGAGGATTCGCCGATGTTCGCCCGGCTGGGACTCGACGGCTCGGCTGAGG12.1739130434782608No Hit
GTTAACCTGGTAGTGTCTTGACCGAGTACATCAGCCTAGTATGTGCGAGC12.1739130434782608No Hit
CTGCCGAGGTCTACAGCCACATCGATGAGAAGGCGCAGGTGGTGGCCGAC12.1739130434782608No Hit
GAGTCAAACTTGATCAGTAACACATCGTTTTGTGGGGTGATACTTTTAAA12.1739130434782608No Hit
ACCGGCTTCCGGTCTGGGTATCAAACTGGCGACCGGTGCTAACGCCCTGG12.1739130434782608No Hit
GGGTTGACGACCAGCATCCGCGCCAGCGCCACCCGCTGCTGCTGCCCGCC12.1739130434782608No Hit
GCCGAGCGGGTGATCGAGAACCTCGCGGAGCTAGAGCCGGAACTGAAGGC12.1739130434782608No Hit
CCCGCAGGCTCTCCAGGAGATGATGCTGCCGATGCAGGTCGGCCAGGCGA12.1739130434782608No Hit
GCGAGCAACGCGAGCAGGGCCAGCGCGAGGCCCGCGTTGATGTCGACCTG12.1739130434782608No Hit
GTGCGTGAGTCCATTGAAGAAGCGGTTTCTGAAGTGGTTAACGCCCTGAA12.1739130434782608No Hit
AGCGCCCAGTTCGTGTCGATATGACGTGGCAGCGGTAGCTGAACGATGTA12.1739130434782608No Hit
GAAGTATGGGTGGGAACGTACGACCAGCAGAGCCAGGATGTGAGAGGATG12.1739130434782608No Hit
ATCCTGAACGCAGCCCAGAAGACCGCGCCCTGCATCAGAACGAAGGCCAG12.1739130434782608No Hit
GATACCACCCAGCAGACCAGCAGCTAGCGCACCGGTGGCGGTTTGGCGCA12.1739130434782608No Hit
GCACAGTCGGATCTCGCCACCTACAACAGTCAGCTTGTCTCTTTGCAGAC12.1739130434782608No Hit
CCCTTACCCTGCACGTTACGTACTTCTGCTTCGATAGTGAACATTGATTT12.1739130434782608No Hit
CCTCTTCGGAGGTGGCGGTGGTCTCGGGGTCCAAGTAGCTCAGCAGGTTG12.1739130434782608No Hit
CGCCGGCGAGGTGGGCCACATGCCTCTCGGTGACGCGTCCGCCCTGTGCG12.1739130434782608No Hit
GGGTTCGCCTTTCAGGTCACGCTCCGCGTTACGCTGATAGGCCCGGCCAT12.1739130434782608No Hit
GGGCAGAGGTGCTAGGAGCCTTTTTCTTAGGCACTGAGTAAGGGTGCATG12.1739130434782608No Hit
AATTCATAGAGATAATGATAGAGCTTTTAGTCATGACTTCCATCACTGGA12.1739130434782608No Hit
CCTCATTACTCCATTTCTTGCGACCCAGTCCGCCCCAAACATGGCTCAGG12.1739130434782608No Hit
CCTGTACCCAATCCGTATACTAAATTCCTCTCTTCCCTACGTTGTGGTAG12.1739130434782608No Hit
GTGTAGTGCATTGTTATGTCCTCAGCATTTAGCGCTCAAAACCAGAGTGT12.1739130434782608No Hit
TCCGAGAGGTCGGCGGCCGTCCGGAACCGGATCGCGGCCGCGCGATTGCA12.1739130434782608No Hit
GTGCGCGGGTGCGTGCCGGTCTGCGCCGCGTACTGCTCGGCGGGCAGCCC12.1739130434782608No Hit
ATCCAGCCCATCGACATCGCCTCTCCCAAGGTGACCGTCGGGCAGGCTGG12.1739130434782608No Hit
ATCCTGGAACGTTCTTCACCGTGGTACAAATTGGCCTGAACGCGGTCGCT12.1739130434782608No Hit
CAGCCGGACTGGACGGTGCTCGGCCCGTTCGTCGCGGTCGCCGTGCTCGG12.1739130434782608No Hit
CATCGTGCTCGGCCTCGTCATCCTGATCGAGGGCGGCGCGTTCGGCCTGT12.1739130434782608No Hit
CTTCATGGAAGAGTTCTCGAACATCCTCCAGCGCCAGACGCGCTAAGGAG12.1739130434782608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)