FastQCFastQC Report
Tue 10 May 2022
EGAF00003677758

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677758
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11431
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT660.577377307322194No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT400.3499256408013297No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT320.2799405126410638No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG230.2012072434607646No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA190.1662146793806316No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA180.15746653836059837No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC180.15746653836059837No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG160.1399702563205319No Hit
GTTTTATTACAATCCAAAAGTTGGGGCGGGGGTTCCTGTGCCACCACACA150.13122211530049865No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG140.1224739742804654No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG130.11372583326043216No Hit
AGATTGGAGTGTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCTGCCTC130.11372583326043216No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT130.11372583326043216No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA130.11372583326043216No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC120.10497769224039892No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG120.10497769224039892No Hit
GTACATGGGAGAACGAGGGGACGTAACGGAGGCAGGTTGGAGCCGCTGCC120.10497769224039892No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG120.10497769224039892No Hit
GTACATGGGGAAGGCCAGTCGGACTGCGACACAGCCCATCCCCTCGACCG120.10497769224039892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)