FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003677797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length140
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCGGCTTCGAAGGCGGCGGCGCCATGGGCGTGCTGTCGCTGGGCGGCG622.22222222222222No Hit
GGCTGTTTGTGGCCGAGGATTTCATCGCCCATGGCGTCGCCGCAGATGGC27.4074074074074066No Hit
GTCTTGTAGCCGGCGAAGTCGGTCAGCTCGTACAGGTTCTCGTTCGTCAC27.4074074074074066No Hit
ACGCGTCCACCGACCGCACCTCCGAGATCTGCCGCGACTTCGCCGAACGG27.4074074074074066No Hit
GGCCTGCCACAAGGTGTGGCGGTGATCGAGGTTCTCGACCTCGCGCTTCG27.4074074074074066No Hit
TCATCTTTCCTATACCCTTCAAAGACTAGAGACTTGTCAGATTCCATTAG13.7037037037037033No Hit
GGTGGACGGCGTCCCGTCGAACAAGCTGTCGGGTGCTCCCGTGGAAGCCA13.7037037037037033No Hit
ATTGAAGACGCCCTTCGGCAAACCCGCCGCATGCAGCGCTTCGGTGATCA13.7037037037037033No Hit
GAACGCGAGCGCCTGGCCGCCGACATGCTGGCGACCATGTACGCCGCGAA13.7037037037037033No Hit
CTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATA13.7037037037037033No Hit
ACCGAGAGGCGTCCTACTCTGACCCCGCTGCTGCGGTGAGTAAATCACGG13.7037037037037033No Hit
ACGCAGCAGAAGCGGGGGTCAAGGTAAAGTTTCATCCGAAGGGAAACCAA13.7037037037037033No Hit
GTGCCGACTATCAATATGTGATGACTCTGATTGAAACTCAAAAGGATAAG13.7037037037037033No Hit
TCGTAGAAGTCACCTCCATAGCCTGGAAGCTCAACTTGATCATCCGGAAA13.7037037037037033No Hit
CAAATCAGTGTGCTCATCCAGTTCAATGGTCGCGATAACGCCATCTGAAC13.7037037037037033No Hit
GGTAGAGGCAGGCGAGCGTCCTGTGCGGCCGCCATGGCTCGGCGATCCGC13.7037037037037033No Hit
GCCTGACCACGCGGCGCGCCCAGGCCACCAGTTCGGGACATCAGCGATTT13.7037037037037033No Hit
ATCTACTACCGCGGCCTGCCGGTCGGGCGGATGCAGAACCTGCGCCTTGC13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)