FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003677798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGCCACAGGCGGCCAGCCCGAATGCCAGGAGCATCGCGAGCAGCGCC622.22222222222222No Hit
CGCGTGTCGGTGCTGAAGGCCGTCGTCACGCAGGCGAGCTCGGCGATCCC27.4074074074074066No Hit
CCCCTGCTTCGGCCCCGCCGATGGCCTGACCATCAACGGTACTGAACGCG27.4074074074074066No Hit
GATCTCCGTGATGCCCACCGTGCAGAGCACCGCTTCCGGCGCCGCGTCCA27.4074074074074066No Hit
GCTCAACGTGGTCAAACTTGGTCCCGGTCTTGGCGATGCCGAGTGTGATG27.4074074074074066No Hit
GGTCAAGCATGATCAGGGGCGACGGCGCCCCGGACTTCCAGTCCGCGTCC13.7037037037037033No Hit
GCTTATCCTTTTGAGTTTCAATCAGAGTCATCACATATTGATAGTCGGCA13.7037037037037033No Hit
CTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTGGGGTAA13.7037037037037033No Hit
GGCCGACGCTGAACCCCGAGACGTCCCAGAACACGGTCGCCGTCGTAAGC13.7037037037037033No Hit
CCCGGGAAGGCTTCTTTATACCTCACTTCGCGGTGCGCTCACATCGCATC13.7037037037037033No Hit
AAACTATCGACTCCTTCCAATTCAATATAGGCCCGGAAGCTGCTGTCGAA13.7037037037037033No Hit
CGGTGATGGTGTTTATACCCGATCAGAAACGACAAATCGTGGCGCAGTTC13.7037037037037033No Hit
GGCCAAGGTCGGGTTCCTGCGCGACCTCGCGGCGCGGATCACGGAGGGCG13.7037037037037033No Hit
CTTAATGTCTGTCTCAATGCTTTGTGACTTAAACATGATTGTGCTATTCG13.7037037037037033No Hit
GGTCAGCAGCAGCTAAGTGAACTGCGCGCCAACGAATCCCGTCTGCGTAA13.7037037037037033No Hit
CGGTGACCCCGTGGGCCGCCATCCCCGCGATCACGAGAGCCGCGCCGGCC13.7037037037037033No Hit
ATCTGCAACAAGCTGGCCACCGCGCTGGCGGCCGGCTGCACCGCGGTCAT13.7037037037037033No Hit
GCACCGGCGGTGCAAGCTGGATATTCGGATATGCGCGATCTCTATCCTGT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)