FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157
Sequences flagged as poor quality0
Sequence length140
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGGATGTAATCGATCGCCGCCGGATCGGCGACGCCGATGCCCAGCAG42.547770700636943No Hit
GCTGTCCCAGCCAGACTCACCACAGCGGCCGCGTCAACAAGTAGCACCAG31.910828025477707No Hit
ATCCCGTCTAGGTAGAGGCCGACTGCGTCCTTACCATCAATGCCATCGGT31.910828025477707No Hit
CGTAGGCCCCGACCGGGTTGCCCGGTAGGGCGAGCACGGGCGTCTCGGCC31.910828025477707No Hit
CTACGGACAGGTTCTGCGGTTCGGAAGATTCGATCCGCGCAGCGTGCGTT31.910828025477707No Hit
GTTCAACATCGAGCCCACCGTGCTTCAGCTCCTAATCGTCGCCGGCATCT31.910828025477707No Hit
GCATAAGGTCGTCGGTAAATTCGTCGAGTTTTACGGTCCTGGCGTTGCTG31.910828025477707No Hit
ATATGTTTCTTCCCCGTGATTGTGTGTCTTATCCCTGTGTTTGTCTGTCA31.910828025477707No Hit
GGGCGCGCAGGGAGTTACCGTGAGCAGCCACGAGCACCGTCTTGCCGTCC31.910828025477707No Hit
GTGTTTCGTGCGCCCGCCGGCGGATCTGCCCGGGTTCAAAGACGGGCTCC21.2738853503184715No Hit
GTTGCCAGCCTTGTCGATGCCCTGCTCGACCTGATCGCTGTGCTGGCTGG21.2738853503184715No Hit
GTCCGGAACCGTCGCGATCTTCTTGGTGGTCACGCCGTTGCCGAAGTCTT21.2738853503184715No Hit
GGGTGACAGCATCCGTGACGCGGTGAACGGTGACCTCCTCGCGCAGAGTG21.2738853503184715No Hit
GCTGGACCTACGCATCGGTGAGCTCGAGAAGTTGTCGAGTCTGCAACAGC21.2738853503184715No Hit
TAATCGTGATGATCAGGCTTGTCAGGTAGACCTTGGGGTTCTTCATCGGG21.2738853503184715No Hit
GATGACGATCGAGGTAGTCGATGATTCGGCAAGGAATGTCTCAAAAACGT21.2738853503184715No Hit
TCTCCGAACATCACCCGAAGCAGATGTCTCAACCGATGACAAAGGAGTCG21.2738853503184715No Hit
GGCCTGGACGCCGACCGCAACACCGTCAACTCGGTGATCCAGAACAACTA21.2738853503184715No Hit
CCGTTCGACAAGCTGCGCTCCCAGGATGCGGCAAGAGCTTCGGTAGAGCA21.2738853503184715No Hit
CACCGACACCAGCACTCGCAATTTGGCCAACCTTGCCGGGCAGATCCCGT21.2738853503184715No Hit
GTCCACCCCCGAGTACTACTGCGTGCTAGCTCCCCACAGCAAAAGCCTTG21.2738853503184715No Hit
TTTTTAAGATATTGCCAATTCACAACACTCTGGCCTTTGCTCATTAATCT21.2738853503184715No Hit
GTATGCGCCCTCCTAGCTGCCTTGCAAAAGGCTGACCCTCATCTTGGAGC21.2738853503184715No Hit
TCGTGGTAGTGAATAGCTGTGCCACCTCGTCGTCAGCGCGCAGGCTGGCG21.2738853503184715No Hit
TACCGCACCCTCGACTCCATGATCTTCGTGTTGGCATCAGGCACCGTCAT21.2738853503184715No Hit
TGTAAGAGGCGCACTTGTACTCCACAACCCGGCCAACCAGGTCGAGAGCA10.6369426751592357No Hit
CTGCAAGGGCGGCGTCCACACGGGACTGCCATATCTCGTTGCCAACGAGC10.6369426751592357No Hit
GGCCAGACGCTCGTCAAGAACCGTGCGTCGGCACACCATGCCGAAATTGG10.6369426751592357No Hit
ATCCGGGGGAGGGCCCGCAACCTCCGTCAAACGGTAACCCTTGGGGTCCG10.6369426751592357No Hit
CTCTAGGCTCGTAATGTGATTGCCGACCAGGGTGCGGGCAACCTTGACGC10.6369426751592357No Hit
CTCTGGCAGACAGGACGTTGGAATTGTCGCCACTGGAAACAGCGGCGAAT10.6369426751592357No Hit
ACCGCACCCCTCGCAGACGTAGCACGATCCCGAGGGACGCATCTTCGTCC10.6369426751592357No Hit
GCTGCCCGAGGTGCCCTACAAGCTGGACTCCATCGTCCAGGCGGTGGAAA10.6369426751592357No Hit
GGGCCGCCCTACTGGCTTCCGGGCGGCGGCAATGAAGCCGGTGAAACGCC10.6369426751592357No Hit
GGCCGAGATCTTCGCAGTGGCAGAGCGCCGGTCTGGGCGGCGGTGTCGGG10.6369426751592357No Hit
GCGAGGGGATGACCGCTCCCAGGGCACGATCATCCCCATGTGGATGACCC10.6369426751592357No Hit
CAGGAGGAAGGTGCCGGTCACGGCCAAACCATAAGCCGTGGCTAGTTTCG10.6369426751592357No Hit
ACGATGAGCAGGGCTACCAGCCACCCTGATACCGGACGTGACGCTTTACG10.6369426751592357No Hit
GAGGCGGGGCAAGGACAACCGACCGGAATACCGCATGCCTGGTGCCCCGG10.6369426751592357No Hit
ACCCAGGTGGATGCGCTGTACCCGAGTTCGGCCGAATTGTCGGCTGGTCA10.6369426751592357No Hit
CTCCTGGCAGACGCAGCCAGCAGTTCAGTGCTCGCAGTACGCTGAAACCG10.6369426751592357No Hit
CATTGGCAACGACGAGGTAGTCACCGTCAGGCAGGTGGTAGGTCACGAGG10.6369426751592357No Hit
GGATGCGCTTGTCGAGGTGGCCGATATCGTCACCGAGATGACGAAGATCA10.6369426751592357No Hit
GACGACGCGAGAGCGGAAGTCGGTCATATCGCCAGGCTCGTAAAGCCATC10.6369426751592357No Hit
GGCTCCTACAGGGCCGAAGACCCCAATTGCCCCGTCGAAGCAGCCGAGTA10.6369426751592357No Hit
GTCCGTGCCACCGAGCAGGCTGCACGCGCTGAGAACTCGGATTCGGTCGC10.6369426751592357No Hit
GTCCACGTAGGCGTCGATTTCGGCGTCGGTGAGGTCGGCAAATGTGACGA10.6369426751592357No Hit
GTAACCGCCTGGTCCATAGTCTCGTCAAGGTCAAGGTCAATGAGCTCGGC10.6369426751592357No Hit
GGTCAATGTCAATGTCGCTGGTCATGTCGTTGTACCTCCGTTCACTGATG10.6369426751592357No Hit
AGCCCTAATTGCACGGCTCCCAGAGATGCCCCCAGCAGATCGCCGGCCTC10.6369426751592357No Hit
GGACAGGTATGCCTGCCCTTCACCGGAGCCATTATCACCAACTGTGATTT10.6369426751592357No Hit
CTACCTGACCATCAGCATCACTTTGAATGCGCAGTTGAACGCCTCGCTCA10.6369426751592357No Hit
CACTGAACAGGTCAACGGGCTTACACGCTGGCTCAATCAGATCGACAACT10.6369426751592357No Hit
ATCCGGGGGAGGGCCCGCAACCTCCGACAAACGGTAACCCTTCGGCTACG10.6369426751592357No Hit
GAGCTGACAGACCGCACAGCCCGACTCCCGTCGTAGGCCTTTTGTCCGGG10.6369426751592357No Hit
GTCTTATGGCGTGCGTCTTGTGCCAGTAATGCTGCTCATGTGGTGGTATG10.6369426751592357No Hit
GGGTACCGCCGTCAATGTCATGCAGATGGTCTTCGGCAACCGTGGCGACC10.6369426751592357No Hit
ATGCCCCGCCGATCTTCGAATCCGTCCAGGCGTTCGCATAGTTCTCAAAT10.6369426751592357No Hit
GATCGGTCGTCTGTGCCATTGCCCCGGCTTTCTGGGTTATCTTCGTCGCC10.6369426751592357No Hit
ATGGGGGTCTGGACTTCGGGACGGTCGGGTCCTACCCGCGTCCGCGTGGT10.6369426751592357No Hit
GCGCCCGGTGCCTCGATAAGACATGAACTCCACCGTAGTCGCAAGTCCAT10.6369426751592357No Hit
GTAGGCGACCTACTCGACGCCGCCGAGGCTCAGAAACAAGCGGAAACAGC10.6369426751592357No Hit
ATCCCACGCCGCTCTCGAACAGCAGCGCGGATGGGGTCGTCAGCTGGCGC10.6369426751592357No Hit
CCACAGGAATTGCCGGTTGGTATAGTCACCGCCTTAGTCGGCGCCCCATT10.6369426751592357No Hit
ATAGCGGACTGTGAGCGTGCGCTAGGACGCCCGCAGGCAGCTCTTCGGCT10.6369426751592357No Hit
CGTCAAGGTCCCTGACGAGCTTGCGGAAATTCTCAATGCCTTCAGGGGCA10.6369426751592357No Hit
CAACTGGGCCATCACGGTCGCTGCTGAATTAGCTGCTGCCTCCATCGTTA10.6369426751592357No Hit
TTCAATTGCTTCCCTAATGCCCTTAACTTTATGAGCAGGGAGGTGTTGTC10.6369426751592357No Hit
GTTGGGATGTTTCTCCGCAGCTATGGATAGTCGTTGCGCGGTAGTGGCGG10.6369426751592357No Hit
GGTTGCAACAGTCATGGGATCAGCCTATGGACTCGCCGGTTCATCTTCCG10.6369426751592357No Hit
CAACTATCCTGCGCACCATGCTCGGCCTGGTGAAGCCGGCTAAGGGCACT10.6369426751592357No Hit
CCTATGGGGCGTATCTTCGGTTTACCGACCCGCGTGTGGAGGTGTGCTCT10.6369426751592357No Hit
GTATAGGTGAGTGGGTGTCACGCGGTAGTTTCAAGTGAAGACGCCGCTGA10.6369426751592357No Hit
CTTCACCTACCTTGAGGATCTCGACACCCAACGTGACAAGACCTTCGACG10.6369426751592357No Hit
GGCCAGTGCGGCCAGGGGAAGTCATCGTGCCAGATGCGGTAAACGGTCAT10.6369426751592357No Hit
GACCACGAAGTCAACCTTATGGCCGAGCTGTACCGCCGATTCATGGACTC10.6369426751592357No Hit
GATCATTGCCCCACTACTGGAGTCCAAGAAGACCGACCCGGGAGTGGTCG10.6369426751592357No Hit
AGCTCGAAGACTTGCTCTCGCAAGCGTAAAGCCACTCAGCTACTCGTGCC10.6369426751592357No Hit
GTACATGAAGTGATCATCAGCCAGCCACTCAAGTAACTCACGACTCGAAT10.6369426751592357No Hit
GATGAGTATCGCCACAGCGGTCGCACTGTTCACATCTGTTGCGGTTTGGT10.6369426751592357No Hit
CTTCAAGGCTTGCGAGATGAAAACCTCGATCCGGCTGCTAAAGCACGACA10.6369426751592357No Hit
ACATAAAGTTTTGTGAGACTTTGCAATTTCACAATGCAGGGATGTGTGAC10.6369426751592357No Hit
ACTGGGATGCGTAGAACGGGTTTTGATATGACGTTCCCTCGGTGGCCTTT10.6369426751592357No Hit
CCACTCAACGGCGAGTCGACCACTAACGCCTCTTCTTTCGACCGTTACCC10.6369426751592357No Hit
GTTGGGACTCTTGACAGCAGGGGTAGCCATATGGCTAGTGTCGACGGTCC10.6369426751592357No Hit
CTTCCGCAGGCACCCTCCCGATGTCAGTTCCGACACCCGGCACGCTCATA10.6369426751592357No Hit
CTGGAGGAGCGGGTCGACGCGCTCGCGCTCGAGGCCAGCGAGGCCGAACG10.6369426751592357No Hit
GGATACGGATCGGGTTGCCCTGGTGGGACTCGAGCTCCGCGATGCCGCTC10.6369426751592357No Hit
TTTCCGAACCAGGCAGGTTAACGATACGTTCCTGCGCGTGGTACATCATG10.6369426751592357No Hit
CCGCAGCTCGCTGGGATTGTCAATCGTGACGACCTTGATGCAGGACCTCG10.6369426751592357No Hit
GCCTTGTGAGCCTCGTCCGACTCTGATGTCCACGGCTTGAGCGCATCGTC10.6369426751592357No Hit
GATCTACGACGTGGCCCATGGGGTGACGGTCCAGCAGGTTGACTGCCCAA10.6369426751592357No Hit
GCGGAGACCGCACTGGCACAAACCGTCGGGGCTCCGGTTTCCGTGTCGGC10.6369426751592357No Hit
CTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTA10.6369426751592357No Hit
CCTTTAATCCGTCAACACCAAACTTCGCGACGCTGCCGACCGTCATCACT10.6369426751592357No Hit
GGATGCTGACCGTCTTGCTCAGGCTCGGGCAGGGGTCGTCGTGAGGTTCG10.6369426751592357No Hit
CGCCAGCCTCGTCCGCAGCGGTGACGCCGTGCAGCAGCTGTCTCTTATAC10.6369426751592357No Hit
CTCACGAGATGGTTATCGACGATGTCGGCCAATTGGTCGAACCACCACAA10.6369426751592357No Hit
CACTCAATCCATAGGCCAGTCCGTAATTCATGGCCTTGATCTTGGAACGT10.6369426751592357No Hit
ATCATCGGGTTCGCCGCCAATTCCCGCAGGTTCAACGAGGCGCCCAACCA10.6369426751592357No Hit
CCGCCTCCTCGTGCGTGCCGTAGACGGCGATCTGCGCGACCTCGCCGGGC10.6369426751592357No Hit
CTTCGAGCCAGGCCGAATGCTGAGCGGCTGGGAAGGCAAAGATGTGGGCC10.6369426751592357No Hit
CCCAGGGACTCTCCGATGTCTCCGCCGTCAAGGGGCGCGTGAGCGTCCCA10.6369426751592357No Hit
ACCCCGACACGAAGGGCAATTCATGATTCGCGTCCACGGATATCTCGGCA10.6369426751592357No Hit
GTGATCAGATCAGCAAAGCATGCCGATTTCGCCGAGTTGACGGCGATCTG10.6369426751592357No Hit
CGCCGGGACCGTGGCGAAGCTGTGTGCCGAGCCCGGCGAGACGGTGGCTG10.6369426751592357No Hit
CCAAACGTGGTGGCTTAAAGAACTCTTCAATGGCCTGTCCCTCGTCGCAG10.6369426751592357No Hit
CTCGTAGGGGAGGTACCGGCCCGTACCTCGGAACGTGAGCTGGTCACGAT10.6369426751592357No Hit
GTGTCCGGTTGCTCTACGTCGCTTTGACCCGCCCTACCCAACGGTTAGCG10.6369426751592357No Hit
GTGTTCCCATGGATGTTAAGGAGGGTGACGTCGTCATCTTCTCCAAGTAC10.6369426751592357No Hit
AGGGTCGAGAGTGGGGCTGCCGTGTTGGACAACGCTCCGGTGCGCGAAGA10.6369426751592357No Hit
AGACCACACCGTCGCCTCAACCAGGTCTCCACGATGTCCGACATACGTGA10.6369426751592357No Hit
CAGCCTCAGTAGCATCGGTGCGGATGCGCTCGGCAATGATGGCCCCGGAC10.6369426751592357No Hit
GTAGTAGGCAGGGCAGCGATGACGGGGCGAATGGCCTTTGGGTAATCCAC10.6369426751592357No Hit
CCCCCACTGCTGAGGGCTGCCACACTGTCGAAGGACCATGGCGGGCCGCC10.6369426751592357No Hit
ACGGGGTGTTGCCGCGCCGGAAGGACGAACGGATCCGTGCCGCCTTCGTC10.6369426751592357No Hit
CCACAGAACCCGCTCATTCCGTCCAACACCAACGAGACCTGCGGCGGAAA10.6369426751592357No Hit
GTGTTTTTGTGGGTGGTCATCGTGGTGTCTTTGTGGTGGTGTGGGGGTCG10.6369426751592357No Hit
CCGCTTTTCACCGGCGCGCCAGCATTCGCAGTACCAGCATCAGCTGTCGG10.6369426751592357No Hit
TCTCAGGGCTCTTGACCTCGAGGATATTCAGCTGGATCTGCTTGCCGGTG10.6369426751592357No Hit
ATATGGCCGAGGGACGGGTTGCGGCGTGGGCTGATGACTGCCGCGATCTC10.6369426751592357No Hit
GGATAGGCCCACTTGTAGGTGCGGTGAGCGTAGCGTGCACCATGAGTCGC10.6369426751592357No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)