FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003677828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCGGGGTCCATGCGCAGCGCCGAGCCGCTAGACGCGCTGCTCTTGAG33.6585365853658534No Hit
AGTAAGAACGGATCCATAATGACTCCTTAGGTTAAGTTTACTTTTTCTTG33.6585365853658534No Hit
GGCACTGGGCGGCTGAAGGCTCCGGAACTGCGCCTGCGCTTTTCGGTGAG22.4390243902439024No Hit
ATCTTGGGGATAATCATAAAAACCACCTTCTCACTGCACATTCACCTGGC22.4390243902439024No Hit
ATGTAAGAAAAAAAGGAACAAGGATGAATTCTAGGATTTTGGCTGGAGCA22.4390243902439024No Hit
GTTTAAGGAATATGGAGTTTCAGTTTAGAATGATTAAAAAAAATCCTAGA22.4390243902439024No Hit
AGATAACGTGCGGCGGCTTGCGCGCGTTCCAGTTCGGGCATGTCGGGCAA22.4390243902439024No Hit
GCGATACAGGTCCAGCGCGGCCACCGCCGCGGCCGCGGCCAGCGGGTGGG22.4390243902439024No Hit
GGCCTCGGCGTGGAAAGACGGATCGCCCAGGTCCAGCACTTCCTGCAGCA22.4390243902439024No Hit
GTCAGCCGCAGTGAATAGGCCCAAGCAACTGTTTATCAAAAACACAGCTC22.4390243902439024No Hit
ACTTAGCACTATAAAACACAAGCATTTATCTCACACTTTCTGATGGTCAG22.4390243902439024No Hit
GTCTTAAAAAAAAAAAGCCTGGGCTGTGGCACTTTGGGAGGCGGAGGCGG11.2195121951219512No Hit
TCCTTCACCAGCGCCGCGCCGACAGACTCACCGCGGCCCGGCAGCAGTTG11.2195121951219512No Hit
GGCTTACTGGCGCAGGTGGCTGATTGTGGATCCGACCTCCACGATGGAAA11.2195121951219512No Hit
TACCGCGATTGAGTATCAGAAAAAAGCCCTGGTTATGATTAAAGATGCTC11.2195121951219512No Hit
GATCGTGAAGGAAGTCTTGGCGGACGCGCACCTCATCTACGATGAGCGTG11.2195121951219512No Hit
GGGCGCGGTGGCTCACGTCTGTAATCTCAGCACTTTGGGAGGCCGAAGCG11.2195121951219512No Hit
ATGTTGTCACTTGCCACGCCAGCCAGCACTGGCTCTGGGAAAATGAAAAA11.2195121951219512No Hit
ACGTACGAGTCGTTGCAGCGCACGGGACACCTGGAGCACTTCGACTTCTT11.2195121951219512No Hit
GCGATCAATCTTTATATCCATAAGCTATTGAATTTAATGGTTTTTGTGAA11.2195121951219512No Hit
AGAAAACCCCATTATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACT11.2195121951219512No Hit
CTTCCTGGGGGAAATGACGAAAAGCGTCAGTAAAACCCAAATTCAACAAC11.2195121951219512No Hit
ACACTCAGGATTTCTGACTCAGGGGGACTGGGCTGGGGTCCAAGACTCTT11.2195121951219512No Hit
GTTGAGCACCCCGTGCGAAACGACAATGTCGTGCTCCGATTCCAGCGCGT11.2195121951219512No Hit
AGTTACTACTGTAGAGGAAGCGATTGAAGGATACCGGATGCAGCTACTGC11.2195121951219512No Hit
ACTACAGGTGCTTTACCACCAAGCTCAAGATGCGCTTTCGCTAGATTTGC11.2195121951219512No Hit
CTCTCAGATAGCTCTGCCTACTGATGGCATTTCCTCTGCAGCCCTGATGT11.2195121951219512No Hit
GAGAAACTACTTTGTGATGTATACATTCATCTCACAGAGTTGAATGAGCA11.2195121951219512No Hit
GCTATGGAACTGACCGGCGTCATCGCCCAATCGATCTTTGACGACAACGC11.2195121951219512No Hit
CCCGGGCAGTGCGGACGAAGTCACTGCCCAGGGTCTGTAGCATGGAGGCC11.2195121951219512No Hit
TCAAATTGTTGAACTTTGCAAACGCTATTACGAGCAAGACGATGAAAGCG11.2195121951219512No Hit
ATTCCACAGGCTCTATAGGAAGCATGGCTGGGAGGCCTCAGGAAACTTAC11.2195121951219512No Hit
CGACACGTGGTGCGCCTTCAGGCAGCACAATGCGTTTCCATTCGGCGCTT11.2195121951219512No Hit
GTCCGGCGCCACGCTGGCGTAACGCTGCACCGGTTCGCTCTCGCTGGGCT11.2195121951219512No Hit
ACCGGGGAGATCTACCGCCAGTTCTCCATCACGCTGATCTCCTCCATGCT11.2195121951219512No Hit
GGTCAAATATATTAGTTCCTGTTCCATCAGAAAAGAGGATGATGTCAGCA11.2195121951219512No Hit
CCACGTTGTTATCGCTAATAAGACTGAAGGCGTAGCTGAAGCAGCAACTG11.2195121951219512No Hit
TAATTCTTGCGGACGGACTGGCTGCCCAGCCCCAGAAGATCGCCGATTCC11.2195121951219512No Hit
TCCCCGGCCAGGGCGCCGTAGAGGCCGGCCTCGCCCAGTTCCTGCTCGTT11.2195121951219512No Hit
CTCCAAGTCCTACATCTTCTGCCTTGATAGCTTTGGGCAGGTGACTCCCT11.2195121951219512No Hit
TGCCTGCTCCTTGCGATCCGCCGGCAGCGGTATGCTGTGCAACATGTCGC11.2195121951219512No Hit
TGTGCGCCACGCGCAGGCGGATGTGCGCGTGGCTTCGTTCAACGTACTGA11.2195121951219512No Hit
GCCATGACTCTGGACTATCAAACTTAGGAGAAATAAAACAATGGTATATT11.2195121951219512No Hit
GCCGTGGAGCAAATCCTCGACTCCTGCCATGCCCTGATGAACTACGGTGT11.2195121951219512No Hit
CCACCAGGCTGGGCACTTCTCTGGAGGCTTTGGGGAAGAATCTGCGTCCA11.2195121951219512No Hit
GGCTTGGCCACTGTTACCAAAGCCTTACTGTCTTGCTTCAGGCTTCCAAA11.2195121951219512No Hit
GGTATTATACGGGGCTTCCTTCCAGCCTCATTCCAGCATTCTCTCAGCAT11.2195121951219512No Hit
CACTTCGATATTGCCGAGAATTTTTGCTCCGGCGCCGATCATTACGCCTT11.2195121951219512No Hit
TACCGCACCTCACCTGGGTGGGCAGATGGAAAGGGGACCACCGAATCAGA11.2195121951219512No Hit
GCGGCGATGACGCTGGCGTAGGGGCTGTTGCGAGCCACCAGCGCACTGAA11.2195121951219512No Hit
GTTCAGGCCCTGCATGATTGCCATATCTCCGCCGTGAACCATGGCGTAAT11.2195121951219512No Hit
GGCCATTGTTGAACACTTCGGCCCGCAGATGCTGCTGGCCGACGGCAGCC11.2195121951219512No Hit
ACTCCAGCCTGGGCTACAGAGCAAGACTCTGTCTCAAAAAAAGAAAAAAG11.2195121951219512No Hit
CTACAGGTGACCACCACCACACCTGACTGATTTTTTTGTATTTTTAGTAG11.2195121951219512No Hit
GTATCGCGATGGGCCACGGCGGGATGCTTTATTCCTTACCAAGCCGTGAT11.2195121951219512No Hit
GGGCTACAGCGCCCAGGAGGTCGACGCCGTGCTGGCGCTGCAGCCCACGC11.2195121951219512No Hit
GAACAGAACAGCCCTTTGACTTCAACGCATGGACAAAGGACAACAAAGGC11.2195121951219512No Hit
GAGCTTCCTGTTTTCCCTACAATTTTTTCAATTTCCGGGAATTTTTTCAT11.2195121951219512No Hit
CGCCATGGCCGAGAACATTGCGCGCGTGCACAACAGCGGCCAGCGCGTGT11.2195121951219512No Hit
CTCTTAGAACTTAATGACTTCATTTTAAACAATTGCCCTTCCTGATGTCA11.2195121951219512No Hit
GTCAAGGTAATGCGCCGACGCAGGATGTCGCCCAGCGGCACCTCGGCCTT11.2195121951219512No Hit
GTGCCTGGGCCGGGCTGGAACAGGGGGGCAGGGCTGCCCACACGGGAAAA11.2195121951219512No Hit
TCTCAAGGTTGCGCGCATATGCCGCCATGACGCGGCTCATGGCGCCGCCA11.2195121951219512No Hit
GGTCTGGCTTTTGATGTATTCGTGGGCGGCAATCAGAAAGCCTGCCGTTC11.2195121951219512No Hit
GAAAAGGAATGGTTAGAATCATGGCAGGTATGTTTGGTCGTGCTGTGCAC11.2195121951219512No Hit
ATTGTTGCCGATGTAAATGCCGACGTGACGGCCCGTGGAGCCGGCGCGGA11.2195121951219512No Hit
ACAGGAAGGTGGCCGGATCCCGGGTCAATACACTGGCACCCACCACCAGC11.2195121951219512No Hit
TCACCCCGGTGGTGACCGGCACCATCATCTGCCTGATGGGCTTGTCGCTG11.2195121951219512No Hit
CGATCAGGCCTGCGATCGTGCCCGGCTTGAAATGCATGTCAATGAAATCG11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)