FastQCFastQC Report
Tue 10 May 2022
EGAF00003677885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30136
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT470.15595964958853198No Hit
CTTCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAATGACAG450.14932306875497744No Hit
GAATTAACCCGAGCAGGCATGGAGGCCTCTGCTCTCACCTCATCAGCAGT390.1294133262543138No Hit
GTCCAGTTGCTCCCAGTGACTGCAGAGTAGCCACAAGGCTGCCCGAGGCA370.12277674542075921No Hit
GTGCCATGGGCTTCACTGCGGCGGGAATCGCCTCGTCCTCCATAGCAGCC360.11945845500398194No Hit
GGCATGGAGGCCTCTGCTCTCACCTCATCAGCAGTGACCAGTGTGGCCAA350.11614016458720466No Hit
GTTCTCTTCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAAT320.10618529333687285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)