FastQCFastQC Report
Tue 10 May 2022
EGAF00003677887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003677887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30005
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCAATGGAGCCCAGGATGAACTTGGTCAATCCGGAGAGTCCAGTTGCT430.14330944842526244No Hit
GTTCTCTTCTCTGCAGGGCGAGGGGCAGGGAGCTAGTAGAACCTCGCAAT430.14330944842526244No Hit
TAGTAGAACCTCGCAATGACAGCCGCAATGGCAGACCCAATGGAGCCCAG400.13331111481419763No Hit
GGTATATTTGGGATAGTTGGCTCCTCGCTGGGTCAGGATGGCTGGGTGCC320.10664889185135812No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT310.10331611398100317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)