FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCAA29.090909090909092No Hit
GACTTCTACTGGCGCATCCGGGTGCAGCCAGGACGCTTTTTCGACCGCCT29.090909090909092No Hit
GGCCTCCCCTAGCCATGTGGAACTGTGAGTCCATTAAACCTTTTCCTGTA14.545454545454546No Hit
CTGCTTAATGGTCACCACAGTCCTCCCCACTCCTCCTAAGAATCTCCCAC14.545454545454546No Hit
GCTTCTATTACTTTAAATCTTTTAGAGGGTATACGCTTTTCCCCTCAATG14.545454545454546No Hit
ACTTCAGGCCTAGCTGACATCTAAACTGCAATCTGATGAGTGACCTTGAG14.545454545454546No Hit
CGATAATTCCGTTCGATTCCATTTGAGGATAATTCCATTTGAGTCCATTC14.545454545454546No Hit
ATATATACCCAATGCCTGTACCACAATTGTATGTTGGAAGTAAATAACTT14.545454545454546No Hit
TATCTGGATAGGGTGCTTCCCTTGGACTGAGGACTTTTCTTTACTTTTGT14.545454545454546No Hit
GGAGAAGAGGTCCCACAAGCAGCACAACCCTAAACAGGAGCTGCAGCGCC14.545454545454546No Hit
TTTGTTAAGTGGGCCTTGTGTGCCAGTCTCCAGGATAGGCACTTTACAGT14.545454545454546No Hit
TTACTGGATCGGGGCTTATCTGATTCAGGAGGCTGGGCTGCAGGAGCGTC14.545454545454546No Hit
GAACACCTCTACACAAATAAACTGGAAAATCTAGAAGAAATGGATAGATT14.545454545454546No Hit
GCCTACACCTTTCTCCCGTGCTGGATGCTTCCTGGATGATCCCTTGAACT14.545454545454546No Hit
CTGCATTGCCCTGCCATCCACTTGTTCTTGAAATTTAGGTTTCATACTTG14.545454545454546No Hit
CAGTAGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCC14.545454545454546No Hit
CTGCCGGCCTTGCGCAGCAGCGGCTGCGTGATGCGCGCGGGGGACACCTG14.545454545454546No Hit
GAACAAAGAGCTCTGGAGAGATGTGGATTCCTGAAGAGCTGCAGGGGAAC14.545454545454546No Hit
ACCAGGATCAGGATGGTCTTCACCGCCGGGATGGCCCAGGCTGCCAGGTG14.545454545454546No Hit
GGCTCGAGTCCAGCGCGGGTGCCTGCAAGGCGAGATTGACGTGGCCGATC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)