FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATGCCACGGTGATCACCCGCGAGAATGGCGTCTTTTGCGGCAAACGC29.090909090909092No Hit
TCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTA29.090909090909092No Hit
GGCCTTAAATGATGCTCAGCTAAGCTGGTTCTTGTGTGGCCTCTGTACCT14.545454545454546No Hit
CAATGGTCCGAGGCAGGACGATAAAGAGGGCACCCATGAGCAAGAAGCCC14.545454545454546No Hit
CCCAAACACCACCCATTAGGCCCCCACTTCCAACATTGGAATAAAATTTC14.545454545454546No Hit
AATTTTAAAAAAAATTCTCTGGGTGTGGTGGGCGCCTGTAGTCCCAGCTA14.545454545454546No Hit
GGTGTGCGCCACTACGCCTGGCCAGCGGTGGTAGTCTTTACAGTTTTATC14.545454545454546No Hit
GTGTTAGCCAGGCTGGTCTCAAACTCCTGACNNNAGGTGATCCACCTGCC14.545454545454546No Hit
TCGTATGGTTTTTGTCTTTGGTTCTGTTTATATGCTGGATTATGTTTATT14.545454545454546No Hit
GGCCTAGGGTGGGGGCCGTCCCTTCCCTGCAGCTTCAGCTGCTGCGGGCT14.545454545454546No Hit
GTCATAGAATGGAATCGAATGGATTCATTGAATGGAATCAGATGGAATCA14.545454545454546No Hit
GTAGGGCTTAAAGAGTGAGGAGGAGGGATTTGAGGGGAAGTTTTCGAAGA14.545454545454546No Hit
GCCGCGGCGCGGGTGCTGCCTTCGCGGGCGGTGGCGACGAAGACTACGAG14.545454545454546No Hit
TCATCATGCCGGCCGAGCTGCGTCGTCAGGCAGAACAGGCCGGCGCGACG14.545454545454546No Hit
ATGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCTTCTGACGCCTGAGCTC14.545454545454546No Hit
GGTGGTGACTGAGATAAATCAGGGAAGGAGACTGAATTAGTGATCTACTG14.545454545454546No Hit
CGTCTACTCCGTGGGCTACCTCATCCGCCTCTTCGCCGGCGCCGAGAGCA14.545454545454546No Hit
CAGGTGGCACTCCACCTGTCCCTCTCTATCTCGTGATCTTGTTTTATTTT14.545454545454546No Hit
TCCTGAGTCTGTTCCAATTTAATGTTTGTCCCTTTAGGTTCGTCTTTGCC14.545454545454546No Hit
GGTTCTTAGAGGTAGTCTAAGAGGTAGTAGTTTGAAGAACACAGCTTTGG14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)