FastQCFastQC Report
Tue 10 May 2022
EGAF00003678230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110357
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGACAGGAACT2320.210226809355093No Hit
ACTCTAGACTGATACCTCCTCATGAAATTTCTGCAGACGTCGCGCCATCG2050.18576075826635374No Hit
GTACATGGGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGC1710.15495165689534873No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG1610.14589015649211198No Hit
TTCTTACACCGCGAGGAAGCTTCCTCGCAACTTTGTGGTAGATTACTATG1570.14226555633081725No Hit
ACCTAATACAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGA1550.1404532562501699No Hit
GATTAAACTGCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTA1540.13954710620984623No Hit
GGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCTCTGAG1530.13864095616952254No Hit
GCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTACTCTAGATT1460.1322979058872568No Hit
GGTATACACAACCTGAGGTCCTCACAGATCTGCTGGGCAGTTTCTCCGGC1320.11961180532272535No Hit
TTATTCTCCTGAGAGGGGAGGACAGCAGAGGGAGTCAGGGGAGGGAGACT1310.11870565528240165No Hit
GTCTGACGATAGTCCAAAAACTGAAGAAGATGGTGGATAAGCCCACCCAG1300.11779950524207798No Hit
GTAGAAGGTATACACAACCTGAGGTCCTCACAGATCTGCTGGGCAGTTTC1200.10873800483884122No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1180.10692570475819387No Hit
TCCCCATAGGGGACACTTATCCTTTGGCTAAACTAATATAAATAATGGAA1170.10601955471787018No Hit
GGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCT1140.10330110459689916No Hit
GTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA1140.10330110459689916No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)