FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length146
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTCAACTTCGGGACTCACCGGTGCAATGACCGGAATCTGACCGCGATC315.0No Hit
ATGTGACCTCGTTCTCGCCCTATTGTCACCAATTCACGGCCCCGGCGGGG315.0No Hit
ACATGGTGTCGCGCGTGCGGATGGGCACCGAGAACATCAACGTCGGGGCG210.0No Hit
GCCGTCCGACGAGCACGCATAGAGCGTGTAGCCATCCGCGGACCACTGCA210.0No Hit
ATTTCCGCTCCGTCAGCTTGCTGTTGCACTTCTGCAGGAAGCGGTCGTTG210.0No Hit
CTTATACACATCTCCGAGCCCACGAGACGGCGAGGCTATTATCGCGTATG15.0No Hit
GAGACGCGCGGCCGCAGCCAAGGCTTCGGCGCGGTTCGTCAGTTCCCAAG15.0No Hit
GGAACAGCGACAGATTCAGGGCACTTTCACCCTGACTGTTTTTCCAGCTT15.0No Hit
GACATGGCACAACGCCCGGTCTATCCCTTCTGCGCCATCGTCGGTCAGGA15.0No Hit
GGGCAGGTCGGTGCGCAGCGCTTCACGCGCATCGTCGGGATCGGCAAGGA15.0No Hit
CGTCTGTTTCAGCTCCTGGAAAATCTTCATCCCCTCTTCCAGGCCCGGGC15.0No Hit
CATTGCGATACCGGCTGTCAGGATGATGCAGGCCAGCGTCAGGGAGGAGA15.0No Hit
CTTCCCTGTCGACCTCAAGAAGAGCGCACCAAAGCTCCTCCCCCACGTCG15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)