FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length146
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGAGGACTCTGGCCTTTTGTCGGCCCGGAAGTCGCGGGTAATTGTTGA315.0No Hit
GCGGTCAGCAGACCCATCCTGGACGGCCTCAGGTTCTGCGGGGTCCTCAT315.0No Hit
CTGCCGCGCGTCGCGACCTGCGCGGCCTGGCCGGCGAGCGACGCGGCCTG210.0No Hit
CGTGGGACACGAGCATGCCGTGTCGGTAGCCGCCTGCAGTCCCCAGTGGT210.0No Hit
CCGCCCGGGCCATCGGCTCCGGCGGCCTGGAGGTGTTCGGCACCCCGTTT210.0No Hit
CGCCATTGGTACTGCTCGCCCGGTAGGATTCCGTATCGACACGTTTGGCA15.0No Hit
CGTCGGGGGATAGGTGGTAGGGCCCGGGAATCTCCCGGTGTTGCGGCAGT15.0No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15.0No Hit
GGGCAGCGGCAAGCTGACTTTAAAAGTCGGCCAGATTGATGGTGAAGCCT15.0No Hit
GCCTCTAACCCACTGAATAAAGAAGTGGTTCGTGAAGCTGGCGCATGGCT15.0No Hit
GGCAAACGACCTGCCGTTCGTGCTGTTTGGCGGTATGAACGTTCTGGAAT15.0No Hit
GTCCGTAACCGGGTCCGGCGCGGCGATCCCTTCGAAGTTCAGCGACTGCA15.0No Hit
GAGTCTGTGTTCTCGTTGGCTTCCTTAGTTCCCGGCAGGAAGCCCTGGGC15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)