FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCCACGGGGCGAAGTGCTTGTGCTCGGTGATCCGCGTGTACGGGACA423.52941176470588No Hit
ACGGCGAGAGGCGGTGCAGCTTGCCGCGCAGCACTTCGCGCTGGGCCACG211.76470588235294No Hit
GGATGTGGCTCCAGGTGCTGCCGCCCTTTTGCGCTAGTCCGGCCGCATCC15.88235294117647No Hit
GTGATGATCGCGGCCAGGATCAGGAACAGCTGGTTGGAGAGCGAGGACTG15.88235294117647No Hit
CCAAACCGCTGATTCACACGACCAATGGTGGAAAGGGCAATCTGAGCATC15.88235294117647No Hit
ACGCCATAGCGCTCGCAAATCTGCTCCAGCAGGCCCGGGGCGGGCTTGCG15.88235294117647No Hit
CTGCAGAAAATGCGCACCTTCTTCGGTTGGTCCCGCACCTCCGACATGCC15.88235294117647No Hit
AATGTGGACTGATGTGCCAAAACACAAAAGTTGCTCAATTCTCAGTCGAT15.88235294117647No Hit
GGTTGACGGCGCCGGAAAGGATTCTGGTCACGACGGTGCCCTTTCGGGGC15.88235294117647No Hit
GCTTGAGCAAAGCGACCAAGGTGAGAACTGCAACCAGGGTGGGCATGGCG15.88235294117647No Hit
CTGCAGGTGGTCCTGCTGATACTCGTTCAATTTGTTGCGCGCCTGATTGT15.88235294117647No Hit
CGAGCGCCGTGTAGCCGCGCTTCATCGCCGCGAGAATGCGGTCCGAACCG15.88235294117647No Hit
GAAAGCGACTGCCCGATCTTCGCGGCCTTCCGCCAGGGACTGCCCTGCCG15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)