FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003678609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003678609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGAGCAGCCAGGATTGCTGCGGCATGTCGGCGAAGTGCTGATCATAGG39.67741935483871No Hit
GTGCTGGGGGCGCTGGCCGGAACCGTCTGCGCCATCAGGGGCAGGGGAGA26.451612903225806No Hit
AGGAACGCGCGCGTGCTCGGCGGCGTCTGCGCGGCCATGGCCGCCAGCGC26.451612903225806No Hit
CCGCGCGCTGGCGGAGCGCCGGCCCCAAGCCGCCGACTTGGTGCTGCCCG26.451612903225806No Hit
ATCTCCAGCGCGCCCACCCACTGCTGGAACGCGGGCTGCACCTGCAGTCG26.451612903225806No Hit
GCTTTGGTGTCGTCCTCGGCGGATGCGCTCGCGCGCTCCTGGTCGGCGGC26.451612903225806No Hit
GGTCTATGGCGGCGGACGCAGCGGCCTCATGGGCGAAGTGGCGCACGCCA26.451612903225806No Hit
GATCGGGATGATGGAGCGGACGGCCGCGATGCTCGCGCTCGAGCACCTCG26.451612903225806No Hit
TATAACGGCAACGCCACGCCGCGTCATTTCTTGTGGTGGGCCAACCCGGC13.225806451612903No Hit
AGCAAATGCTTCTGCTGCTGACTTCCCTTGAATGAGATCGTCAACGATAC13.225806451612903No Hit
GCCTCTGCCTCCTCGCTCAACTTTGGTCGGAGAAGACACACAAACTCGGG13.225806451612903No Hit
CTACTAGCTGCTGGGCTTGGGCTCGTGAGAAAGCCTTCAGATCCCCGCTG13.225806451612903No Hit
CGCCGACAGCGCGAGCGGCATCCTGCCAGCACTCGCCCGCCGCATCGCCA13.225806451612903No Hit
CTGAGATGAGAACCGACGCTACTGAAGCGCAGATGCTCAGTCCGAGGAGG13.225806451612903No Hit
ACCGGCGGGCGACCCGGCTGAACGGCTCGGTGGGAATCTCCAGGCTGGGG13.225806451612903No Hit
GTGCCACTCCTTCCAGGCCCAACGCCCTTGAAACCACTGCCTACTGAGCT13.225806451612903No Hit
ACATATAGGTAAAGCTTGTAATATGCATGCAAGCTACCAACCGGCATGAC13.225806451612903No Hit
CTCCAGGACCGCGACGTCGGCAGCCAGCAGTACGCGCAAATAACAGGAGA13.225806451612903No Hit
CACGTCCGCTCGACCGCCGAGATCGGGGTCTTCCGGATCACCGGCGAGGG13.225806451612903No Hit
CTCCAGGACCGCGACGTCGGCCGCCAGCCGGCCGCGCAGATCGACGGCAC13.225806451612903No Hit
CCCCAGTCCTGCGAAATCACGCCGACCGGCATGGCCAGCTGGACGCCGTT13.225806451612903No Hit
CTCCAGGACCGCGACGTCGGCCGCCAGCCGGCCGCGGGATTAAAAGCTTA13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)